RNA–Protein interactions for RNA: ENST00000603334.1

DDX55P1-201, Transcript of DEAD-box helicase 55 pseudogene 1, humanhuman

BASIC

Gene DDX55P1, Length 1,414 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55P1-201ENST00000603334 WDR44Q5JSH3 913 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 TRIM65Q6PJ69 517 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 SV2AQ7L0J3 742 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 NLRC5Q86WI3 1866 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 TMEM139Q8IV31 216 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 BRSK2Q8IWQ3 736 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 CRIPAKQ8N1N5 446 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 FBXL13Q8NEE6 735 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 CCDC42Q96M95 316 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 NT5C1BQ96P26 610 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 CGRRF1Q99675 332 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 ZBED2Q9BTP6 218 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 PDZD7Q9H5P4 517 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 PTPRHQ9HD43 1115 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 RRAGDQ9NQL2 400 aaPredicted RBP11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 CNTNAP2Q9UHC6 1331 aa11.1□□□□□ -0.63
DDX55P1-201ENST00000603334 A0A0U1RQF3 1178 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 LCHNA4D1U4 455 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 C9IYK1 514 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 OFD1O75665 1012 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 IPO7O95373 1038 aaKnown RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 EOMESO95936 686 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 TNNC2P02585 160 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 CA3P07451 260 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 CLTAP09496 248 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 TMEM191BP0C7N4 346 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 FOSL2P15408 326 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 PROZP22891 400 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 PIK3CAP42336 1068 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 RAB27AP51159 221 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 ENPEPQ07075 957 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 MTF1Q14872 753 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 EPC2Q52LR7 807 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 IQCEQ6IPM2 695 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 RAD9BQ6WBX8 426 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 RTN4RL1Q86UN2 441 aaPredicted RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 CCAR2Q8N163 923 aaKnown RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 MAFAQ8NHW3 353 aaPredicted RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 SP7Q8TDD2 431 aaPredicted RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 BAP1Q92560 729 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 ZNF516Q92618 1163 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 ANKRD36BP1Q96IX9 119 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 SAMD11Q96NU1 681 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 ACAP3Q96P50 834 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 ADAM2Q99965 735 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 CCDC94Q9BW85 323 aaPredicted RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 TRIM6Q9C030 488 aaPredicted RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 PRDM12Q9H4Q4 367 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 SLC28A3Q9HAS3 691 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 SIX2Q9NPC8 291 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 RAB20Q9NX57 234 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 TMEM161AQ9NX61 479 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 CPSF3Q9UKF6 684 aaKnown RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 R3HCC1Q9Y3T6 440 aaKnown RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 EPN1Q9Y6I3 576 aaPredicted RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 A0A1B0GUA9 196 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 CARNS1A5YM72 827 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 ABLIM1O14639 778 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 AKR1B10O60218 316 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 ZNF623O75123 536 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 IL18RAPO95256 599 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 HLA-DRAP01903 254 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 C4BPAP04003 597 aaKnown RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 CXCL8P10145 99 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 EIF4A3P38919 411 aaKnown RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 USP8P40818 1118 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 AP3M2P53677 418 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 MFAP3P55082 362 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 TFAMQ00059 246 aaKnown RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 KLHL30Q0D2K2 578 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 TRPC3Q13507 836 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 DRAP1Q14919 205 aaPredicted RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 DUOXA2Q1HG44 320 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 DCAF4L1Q3SXM0 396 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 NOTUMQ6P988 496 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 TOGARAM2Q6ZUX3 1019 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 PPM1KQ8N3J5 372 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 CEP120Q8N960 986 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 LINC01599Q8WXQ3 324 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 SEMA4DQ92854 862 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 FAM84AQ96KN4 292 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 YME1L1Q96TA2 773 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 DESI2Q9BSY9 194 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 APOL6Q9BWW8 343 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 STK33Q9BYT3 514 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 NHEJ1Q9H9Q4 299 aaPredicted RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 APEX2Q9UBZ4 518 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 LRFN2Q9ULH4 789 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 PLAGL2Q9UPG8 496 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 PIN4Q9Y237 131 aaKnown RBP11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 PPP2R2CQ9Y2T4 447 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 RWDD3Q9Y3V2 267 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 DAAM1Q9Y4D1 1078 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 PCDHB7Q9Y5E2 793 aa11.09□□□□□ -0.63
DDX55P1-201ENST00000603334 MYH10P35580 1976 aa11.08□□□□□ -0.64
DDX55P1-201ENST00000603334 KIAA1671Q9BY89 1806 aa11.08□□□□□ -0.64
DDX55P1-201ENST00000603334 LACTBL1A8MY62 500 aa11.08□□□□□ -0.64
DDX55P1-201ENST00000603334 PMM2O15305 246 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms