RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 PSMD2Q13200 908 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 ANKRD54Q6NXT1 300 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 KRBA2Q6ZNG9 492 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 EP400NLQ6ZTU2 488 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 GRAMD1CQ8IYS0 662 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 SYCP3Q8IZU3 236 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 C3orf58Q8NDZ4 430 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 GLIS3Q8NEA6 775 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 PIK3R5Q8WYR1 880 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 ATOH1Q92858 354 aaPredicted RBP17.58■□□□□ 0.4
LSM4-206ENST00000600289 C18orf25Q96B23 403 aaPredicted RBP17.58■□□□□ 0.4
LSM4-206ENST00000600289 TTPALQ9BTX7 342 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 DZANK1Q9NVP4 752 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 C2CD2Q9Y426 696 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 GVINP1Q7Z2Y8 2422 aa17.58■□□□□ 0.4
LSM4-206ENST00000600289 IL18RAPO95256 599 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 ADH1AP07327 375 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 CA8P35219 290 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 ACOT2P49753 483 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 CLCN4P51793 760 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 RTP2Q5QGT7 225 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 SPATA1Q5VX52 437 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 KIAA1841Q6NSI8 718 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 NT5DC4Q86YG4 428 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 HASPINQ8TF76 798 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 SCFD1Q8WVM8 642 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 KIF12Q96FN5 646 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 CGNQ9P2M7 1197 aaKnown RBP17.57■□□□□ 0.4
LSM4-206ENST00000600289 TUBGCP4Q9UGJ1 667 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 EPG5Q9HCE0 2579 aa17.57■□□□□ 0.4
LSM4-206ENST00000600289 PRR23AA6NEV1 266 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 TEX28O15482 410 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 KRT37O76014 449 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 ZNF202O95125 648 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 PAPLNO95428 1278 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 PAX3P23760 479 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 RBM10P98175 930 aaKnown RBP17.56■□□□□ 0.4
LSM4-206ENST00000600289 FAM171A1Q5VUB5 890 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 KANK3Q6NY19 840 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 BRSK2Q8IWQ3 736 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 FMR1NBQ8N0W7 255 aaPredicted RBP17.56■□□□□ 0.4
LSM4-206ENST00000600289 TMEM87AQ8NBN3 555 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 HDAC7Q8WUI4 952 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 CCDC34Q96HJ3 373 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 CBWD1Q9BRT8 395 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 ZNF292O60281 2723 aa17.56■□□□□ 0.4
LSM4-206ENST00000600289 SCN1AP35498 2009 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 C2CD2LO14523 706 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 SYN3O14994 580 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 EXTL3O43909 919 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 KLRC2P26717 231 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 ID4P47928 161 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 AARSP49588 968 aaKnown RBP eCLIP17.55■□□□□ 0.4
LSM4-206ENST00000600289 ZXDAP98168 799 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 DPYDQ12882 1025 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 CLUL1Q15846 466 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 KMT5BQ4FZB7 885 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 TPRNQ4KMQ1 711 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 JADE1Q6IE81 842 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 LLGL2Q6P1M3 1020 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 ARMCX5Q6P1M9 558 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 SYCE2Q6PIF2 218 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 C12orf56Q8IXR9 622 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 ENGASEQ8NFI3 743 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 LNX1Q8TBB1 728 aaPredicted RBP17.55■□□□□ 0.4
LSM4-206ENST00000600289 TMEM174Q8WUU8 243 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 RIN2Q8WYP3 895 aaPredicted RBP17.55■□□□□ 0.4
LSM4-206ENST00000600289 SUSD6Q92537 303 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 B3GALT6Q96L58 329 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 S1PR5Q9H228 398 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 EXOC1Q9NV70 894 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 CHMP5Q9NZZ3 219 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 DPP7Q9UHL4 492 aa17.55■□□□□ 0.4
LSM4-206ENST00000600289 GOLGA6L4A6NEF3 574 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 H0Y858 1186 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 TGFB1I1O43294 461 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 RHOBTB3O94955 611 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 RPN1P04843 607 aaKnown RBP17.54■□□□□ 0.4
LSM4-206ENST00000600289 EPCAMP16422 314 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 IGFBP6P24592 240 aaPredicted RBP17.54■□□□□ 0.4
LSM4-206ENST00000600289 FAM160A1Q05DH4 1040 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 ITIH3Q06033 890 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 SPAG1Q07617 926 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 TMEM132DQ14C87 1099 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 PSMD5Q16401 504 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 GPD1LQ8N335 351 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 KIAA0895Q8NCT3 520 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 BEST2Q8NFU1 509 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 SUSD3Q96L08 255 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 FAM213AQ9BRX8 229 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 RHOBTB2Q9BYZ6 727 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 IRF2BPLQ9H1B7 796 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 KIAA1586Q9HCI6 787 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 SLC39A2Q9NP94 309 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 AGPAT3Q9NRZ7 376 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 MTRRQ9UBK8 725 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 BACE2Q9Y5Z0 518 aa17.54■□□□□ 0.4
LSM4-206ENST00000600289 ANO9A1A5B4 782 aa17.53■□□□□ 0.4
LSM4-206ENST00000600289 M0QZQ0 153 aa17.53■□□□□ 0.4
LSM4-206ENST00000600289 GLUD1P00367 558 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms