RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 CAND2O75155 1236 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 EYA4O95677 639 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 PDGFRAP16234 1089 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 NLRP11P59045 1033 aaKnown RBP12.41□□□□□ -0.42
SCN8A-208ENST00000599343 LVRNQ6Q4G3 990 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 FAM180AQ6UWF9 173 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 TRPM8Q7Z2W7 1104 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 RAB42Q8N4Z0 105 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 SH3TC2Q8TF17 1288 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 DNAJC9Q8WXX5 260 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 ARHGEF26Q96DR7 871 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 CCDC134Q9H6E4 229 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 GIMAP4Q9NUV9 329 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 ZSCAN32Q9NX65 697 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 COPG1Q9Y678 874 aaKnown RBP12.41□□□□□ -0.42
SCN8A-208ENST00000599343 CPDO75976 1380 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 RAD51CO43502 376 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 KIF1CO43896 1103 aaKnown RBP12.41□□□□□ -0.42
SCN8A-208ENST00000599343 WEE2P0C1S8 567 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 ERVK-7P63135 1459 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 ORC2Q13416 577 aaPredicted RBP12.41□□□□□ -0.42
SCN8A-208ENST00000599343 ANGPT1Q15389 498 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 SLC18A3Q16572 532 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 CEP78Q5JTW2 689 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 KCNK16Q96T55 309 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 USE1Q9NZ43 259 aa12.41□□□□□ -0.42
SCN8A-208ENST00000599343 PIN4Q9Y237 131 aaKnown RBP12.41□□□□□ -0.42
SCN8A-208ENST00000599343 NDUFS3O75489 264 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 ITIH2P19823 946 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 CCDC81Q6ZN84 652 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 DDX42Q86XP3 938 aaKnown RBP eCLIP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 TTC39CQ8N584 583 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 VPS50Q96JG6 964 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 CNBD2Q96M20 576 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 FAM205CA6NFA0 338 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 GSG1L2A8MUP6 293 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 AP3M2P53677 418 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 E4F1Q66K89 784 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 EFHBQ8N7U6 833 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 RUBCNQ92622 972 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 GFM2Q969S9 779 aaKnown RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 TMEM143Q96AN5 459 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 PABPC5Q96DU9 382 aaKnown RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 CELF4Q9BZC1 486 aaKnown RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 TMEM94Q12767 1356 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 TMEM120BA0PK00 339 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 PDXKO00764 312 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 GSNP06396 782 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 IRF1P10914 325 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 CCZ1BP86790 482 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 CCZ1P86791 482 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 SLC30A9Q6PML9 568 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 CELF1Q92879 486 aaKnown RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 PLEKHA8Q96JA3 519 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 TNIP3Q96KP6 325 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 SYNDIG1Q9H7V2 258 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 TSC22D4Q9Y3Q8 395 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 SNX9Q9Y5X1 595 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 MYO3BQ8WXR4 1341 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 EEF2KO00418 725 aaKnown RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 PDGFRBP09619 1106 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 SOAT1P35610 550 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 KLK7P49862 253 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 PWP1Q13610 501 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 TRAF7Q6Q0C0 670 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 CCNI2Q6ZMN8 369 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 SRBD1Q8N5C6 995 aaKnown RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 TSPAN17Q96FV3 270 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 ACAD9Q9H845 621 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 LATS2Q9NRM7 1088 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 H2AFY2Q9P0M6 372 aaPredicted RBP12.4□□□□□ -0.42
SCN8A-208ENST00000599343 ZDHHC9Q9Y397 364 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 ADAMTS12P58397 1594 aa12.4□□□□□ -0.42
SCN8A-208ENST00000599343 LOC100653049A0A140TA62 436 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 SLC16A3O15427 465 aaKnown RBP12.4□□□□□ -0.43
SCN8A-208ENST00000599343 CDH16O75309 829 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 KRT34O76011 436 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 GYS1P13807 737 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 GTF2H3Q13889 308 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 EPHA7Q15375 998 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 DAB2IPQ5VWQ8 1189 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 IYDQ6PHW0 289 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 SHCBP1Q8NEM2 672 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 SNRNP27Q8WVK2 155 aaKnown RBP12.4□□□□□ -0.43
SCN8A-208ENST00000599343 OTUD5Q96G74 571 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 USP6P35125 1406 aa12.4□□□□□ -0.43
SCN8A-208ENST00000599343 KRT87PA6NCN2 255 aa12.39□□□□□ -0.43
SCN8A-208ENST00000599343 M0R3G1 203 aa12.39□□□□□ -0.43
SCN8A-208ENST00000599343 IGF2BP3O00425 579 aaKnown RBP eCLIP12.39□□□□□ -0.43
SCN8A-208ENST00000599343 LZTS3O60299 673 aaPredicted RBP12.39□□□□□ -0.43
SCN8A-208ENST00000599343 AKR1B1P15121 316 aa12.39□□□□□ -0.43
SCN8A-208ENST00000599343 DDX5P17844 614 aaKnown RBP12.39□□□□□ -0.43
SCN8A-208ENST00000599343 MLH1P40692 756 aa12.39□□□□□ -0.43
SCN8A-208ENST00000599343 RUNX1T1Q06455 604 aa12.39□□□□□ -0.43
SCN8A-208ENST00000599343 KCNB1Q14721 858 aa12.39□□□□□ -0.43
SCN8A-208ENST00000599343 PRPF18Q99633 342 aaKnown RBP12.39□□□□□ -0.43
SCN8A-208ENST00000599343 STK33Q9BYT3 514 aa12.39□□□□□ -0.43
SCN8A-208ENST00000599343 SATB2Q9UPW6 733 aa12.39□□□□□ -0.43
SCN8A-208ENST00000599343 PCDHA10Q9Y5I2 948 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms