RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 POU2F2P09086 479 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 CYP3A5P20815 502 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 STK38Q15208 465 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 E2F4Q16254 413 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 JADE1Q6IE81 842 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 CCDC73Q6ZRK6 1079 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 ZNF720Q7Z2F6 126 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 SUGP1Q8IWZ8 645 aaKnown RBP14.2□□□□□ -0.14
LIG1-212ENST00000596549 PDILTQ8N807 584 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 HVCN1Q96D96 273 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 RPF1Q9H9Y2 349 aaKnown RBP14.2□□□□□ -0.14
LIG1-212ENST00000596549 OLFML3Q9NRN5 406 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 FBXL5Q9UKA1 691 aa14.2□□□□□ -0.14
LIG1-212ENST00000596549 M0QZQ0 153 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 SPTLC2O15270 562 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 PPP6R2O75170 966 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 ABLIM3O94929 683 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 YEATS4O95619 227 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 F13A1P00488 732 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 FSHRP23945 695 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 ADSSP30520 456 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 ABCD1P33897 745 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 ACOT2P49753 483 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 WNT7BP56706 349 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 TDGQ13569 410 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 KYAT1Q16773 422 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 SPATA1Q5VX52 437 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 CWF19L1Q69YN2 538 aaKnown RBP14.19□□□□□ -0.14
LIG1-212ENST00000596549 ZNF280DQ6N043 979 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 SHC4Q6S5L8 630 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 CRELD2Q6UXH1 353 aaPredicted RBP14.19□□□□□ -0.14
LIG1-212ENST00000596549 SV2BQ7L1I2 683 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 ST13P5Q8NFI4 369 aaPredicted RBP14.19□□□□□ -0.14
LIG1-212ENST00000596549 PANK2Q9BZ23 570 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 KCNH6Q9H252 994 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 TBC1D7Q9P0N9 293 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 IGSF9Q9P2J2 1179 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 TFIP11Q9UBB9 837 aaKnown RBP14.19□□□□□ -0.14
LIG1-212ENST00000596549 DNMT3BQ9UBC3 853 aaKnown RBP14.19□□□□□ -0.14
LIG1-212ENST00000596549 SEL1LQ9UBV2 794 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 PCDHB8Q9UN66 801 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 DENND4CQ5VZ89 1909 aa14.19□□□□□ -0.14
LIG1-212ENST00000596549 TICRRQ7Z2Z1 1910 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 ANHXE9PGG2 379 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 GCNT3O95395 438 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 SEC24AO95486 1093 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 ZSCAN22P10073 491 aaPredicted RBP14.18□□□□□ -0.14
LIG1-212ENST00000596549 LAMP2P13473 410 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 GAP43P17677 238 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 NHLH1Q02575 133 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 HTR4Q13639 388 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 CTXN3Q4LDR2 81 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 L1TD1Q5T7N2 865 aaKnown RBP14.18□□□□□ -0.14
LIG1-212ENST00000596549 ADALQ6DHV7 355 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 EFCAB13Q8IY85 973 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 GLIS3Q8NEA6 775 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 ZSWIM2Q8NEG5 633 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 ZNF461Q8TAF7 563 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 ITFG1Q8TB96 612 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 FAM212AQ96EL1 285 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 MRPL44Q9H9J2 332 aaKnown RBP14.18□□□□□ -0.14
LIG1-212ENST00000596549 POLIQ9UNA4 740 aa14.18□□□□□ -0.14
LIG1-212ENST00000596549 TIMM13Q9Y5L4 95 aaPredicted RBP14.18□□□□□ -0.14
LIG1-212ENST00000596549 KIF26AQ9ULI4 1882 aaPredicted RBP14.18□□□□□ -0.14
LIG1-212ENST00000596549 ARHGEF37A1IGU5 675 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 H7C4K7 107 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 NRG2O14511 850 aaPredicted RBP14.17□□□□□ -0.14
LIG1-212ENST00000596549 SPTLC1O15269 473 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 XYLBO75191 536 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 VNN2O95498 520 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 IDEP14735 1019 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 ATF2P15336 505 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 AVPR2P30518 371 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 HOXD11P31277 338 aaPredicted RBP14.17□□□□□ -0.14
LIG1-212ENST00000596549 ARPP19P56211 112 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 TCF15Q12870 199 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 SLC5A9Q2M3M2 681 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 UVSSAQ2YD98 709 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 FOXD4L6Q3SYB3 417 aaPredicted RBP14.17□□□□□ -0.14
LIG1-212ENST00000596549 POTEHQ6S545 545 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 FOXD4L3Q6VB84 417 aaPredicted RBP14.17□□□□□ -0.14
LIG1-212ENST00000596549 NPAS3Q8IXF0 933 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 TMEM105Q8N8V8 129 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 FGF14Q92915 247 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 ZNF396Q96N95 335 aaPredicted RBP14.17□□□□□ -0.14
LIG1-212ENST00000596549 TNMDQ9H2S6 317 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.17□□□□□ -0.146e-7■■■■□ 24.2
LIG1-212ENST00000596549 AGO2Q9UKV8 859 aaKnown RBP14.17□□□□□ -0.14
LIG1-212ENST00000596549 CDH7Q9ULB5 785 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 INSL5Q9Y5Q6 135 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 NUMBLQ9Y6R0 609 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 ZDBF2Q9HCK1 2354 aa14.17□□□□□ -0.14
LIG1-212ENST00000596549 ANO9A1A5B4 782 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 XPOTO43592 962 aaKnown RBP14.16□□□□□ -0.14
LIG1-212ENST00000596549 CFHP08603 1231 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 OR4Q2P0C623 313 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 YWHAHQ04917 246 aaPredicted RBP14.16□□□□□ -0.14
LIG1-212ENST00000596549 TMEM132DQ14C87 1099 aa14.16□□□□□ -0.14
LIG1-212ENST00000596549 PABPC1LQ4VXU2 614 aaKnown RBP14.16□□□□□ -0.14
LIG1-212ENST00000596549 C9orf57Q5W0N0 161 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms