RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 GPR75-ASB3A0A0A6YYF3 556 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 LRRIQ3A6PVS8 624 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-228ENST00000592705 S100BP04271 92 aaPredicted RBP13.42□□□□□ -0.26
DNMT1-228ENST00000592705 HIF1AQ16665 826 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 PDZD8Q8NEN9 1154 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 SGSM3Q96HU1 749 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 CYTH2Q99418 400 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 HEY1Q9Y5J3 304 aa13.42□□□□□ -0.26
DNMT1-228ENST00000592705 GLTPD2A6NH11 291 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 MAFGO15525 162 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 CASP7P55210 303 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 MXD4Q14582 209 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-228ENST00000592705 GRAMD1BQ3KR37 738 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 TPCN2Q8NHX9 752 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 ANKZF1Q9H8Y5 726 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 PRR12Q9ULL5 1215 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 CFLARO15519 480 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 ASAP2O43150 1006 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 ADCY3O60266 1144 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 SDC4P31431 198 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 SLC38A7Q9NVC3 462 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 PCSK1NQ9UHG2 260 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 BAG5Q9UL15 447 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 M0QYV0 167 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 HBP1O60381 514 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 HSD17B3P37058 310 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 C1orf146Q5VVC0 180 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 KLC3Q6P597 504 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 CDKL3Q8IVW4 592 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-228ENST00000592705 CASKIN2Q8WXE0 1202 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 DHX38Q92620 1227 aaKnown RBP13.41□□□□□ -0.26
DNMT1-228ENST00000592705 POLR3CQ9BUI4 534 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-228ENST00000592705 COLEC11Q9BWP8 271 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 CARD9Q9H257 536 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 GPRC5DQ9NZD1 345 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 SETSIPP0DME0 302 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 LONRF1Q17RB8 773 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 HP1BP3Q5SSJ5 553 aaPredicted RBP13.41□□□□□ -0.26
DNMT1-228ENST00000592705 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.41□□□□□ -0.26
DNMT1-228ENST00000592705 ACAP3Q96P50 834 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 TRIM62Q9BVG3 475 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 PCDHB12Q9Y5F1 795 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 ALG6Q9Y672 507 aa13.41□□□□□ -0.26
DNMT1-228ENST00000592705 CCDC22O60826 627 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 LRG1P02750 347 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 AP2B1P63010 937 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 PPATQ06203 517 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 KCNV2Q8TDN2 545 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 KIF12Q96FN5 646 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 FER1L4A9Z1Z3 1794 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 TCRBV5S4A2TA0A5A2 114 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 CA12O43570 354 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 COMTP21964 271 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 PPARGP37231 505 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 OR1G1P47890 313 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 RAD23BP54727 409 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 PKN1Q16512 942 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 ACCSLQ4AC99 568 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 KRT80Q6KB66 452 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 DDX42Q86XP3 938 aaKnown RBP eCLIP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 NUDCD3Q8IVD9 361 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 RBM15Q96T37 977 aaKnown RBP eCLIP13.4□□□□□ -0.269e-8■■■■■ 27.3
DNMT1-228ENST00000592705 MYPNQ86TC9 1320 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 PDE1CQ14123 709 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 SNRNP35Q16560 246 aaKnown RBP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 RAB21Q9UL25 225 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 G3BP2Q9UN86 482 aaKnown RBP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 CAPN6Q9Y6Q1 641 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 SLC37A4O43826 429 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 HSPA8P11142 646 aaKnown RBP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 AKR1A1P14550 325 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 BCAR1P56945 870 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 TMEM132BQ14DG7 1078 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 DUOXA2Q1HG44 320 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 P3H1Q32P28 736 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 TRPM8Q7Z2W7 1104 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 CATSPER3Q86XQ3 398 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 RNF168Q8IYW5 571 aaPredicted RBP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 SENP7Q9BQF6 1050 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 CELF4Q9BZC1 486 aaKnown RBP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 MFSD1Q9H3U5 465 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 SYNDIG1Q9H7V2 258 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 NAGPAQ9UK23 515 aa13.4□□□□□ -0.26
DNMT1-228ENST00000592705 DBR1Q9UK59 544 aaKnown RBP13.4□□□□□ -0.26
DNMT1-228ENST00000592705 GPR182O15218 404 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 APOEP02649 317 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 SLC4A1P02730 911 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 TAC1P20366 129 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 SEC24CP53992 1094 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 COPS2P61201 443 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 NOP14P78316 857 aaKnown RBP13.39□□□□□ -0.27
DNMT1-228ENST00000592705 ZC2HC1CQ53FD0 456 aaPredicted RBP13.39□□□□□ -0.27
DNMT1-228ENST00000592705 CLEC10AQ8IUN9 316 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 AGGF1Q8N302 714 aaeCLIP13.39□□□□□ -0.274e-6■■■■■ 27.3
DNMT1-228ENST00000592705 SLC30A5Q8TAD4 765 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 UPF3AQ9H1J1 476 aaKnown RBP13.39□□□□□ -0.27
DNMT1-228ENST00000592705 TRPC7Q9HCX4 862 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 TRIM33Q9UPN9 1127 aa13.39□□□□□ -0.27
DNMT1-228ENST00000592705 FIS1Q9Y3D6 152 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms