RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 BRCC3P46736 316 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 CYP2J2P51589 502 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 DLX2Q07687 328 aaPredicted RBP20.18■□□□□ 0.82
TCF3-216ENST00000592395 RTP2Q5QGT7 225 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 PDXDC1Q6P996 788 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 CEP57Q86XR8 500 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 CBWD2Q8IUF1 395 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 EFCAB13Q8IY85 973 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 XXYLT1Q8NBI6 393 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 SPATA20Q8TB22 786 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 SMARCE1Q969G3 411 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 KCTD10Q9H3F6 313 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 PCDHA5Q9Y5H7 936 aa20.18■□□□□ 0.82
TCF3-216ENST00000592395 H3BQ06 376 aaPredicted RBP20.17■□□□□ 0.82
TCF3-216ENST00000592395 PDXKO00764 312 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 TEX28O15482 410 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 KLRC2P26717 231 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 MCM4P33991 863 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 GUCY2FP51841 1108 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 WNT7BP56706 349 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 RBM10P98175 930 aaKnown RBP20.17■□□□□ 0.82
TCF3-216ENST00000592395 SURF1Q15526 300 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 TJAP1Q5JTD0 557 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 LLGL2Q6P1M3 1020 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 GUF1Q8N442 669 aaKnown RBP20.17■□□□□ 0.82
TCF3-216ENST00000592395 PIK3R5Q8WYR1 880 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 CASP10Q92851 521 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 CLEC1BQ9P126 229 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 FNIP2Q9P278 1114 aa20.17■□□□□ 0.82
TCF3-216ENST00000592395 BARX2Q9UMQ3 279 aaPredicted RBP20.17■□□□□ 0.82
TCF3-216ENST00000592395 PLXNA3P51805 1871 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 I3L4J1 428 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 SYN3O14994 580 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 PSMD5Q16401 504 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 SNRNP35Q16560 246 aaKnown RBP20.16■□□□□ 0.82
TCF3-216ENST00000592395 PUS10Q3MIT2 529 aaKnown RBP20.16■□□□□ 0.82
TCF3-216ENST00000592395 PRSS55Q6UWB4 352 aaPredicted RBP20.16■□□□□ 0.82
TCF3-216ENST00000592395 SLC9A9Q8IVB4 645 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 TMEM130Q8N3G9 435 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 LNX1Q8TBB1 728 aaPredicted RBP20.16■□□□□ 0.82
TCF3-216ENST00000592395 SLC22A17Q8WUG5 538 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 CACTINQ8WUQ7 758 aaKnown RBP20.16■□□□□ 0.82
TCF3-216ENST00000592395 TMEM174Q8WUU8 243 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 MSLNLQ96KJ4 702 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 SUSD3Q96L08 255 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 GBP4Q96PP9 640 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 GTPBP4Q9BZE4 634 aaKnown RBP20.16■□□□□ 0.82
TCF3-216ENST00000592395 PDE11AQ9HCR9 933 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 DPP3Q9NY33 737 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 CD207Q9UJ71 328 aa20.16■□□□□ 0.82
TCF3-216ENST00000592395 ANO9A1A5B4 782 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 TULP1O00294 542 aaPredicted RBP20.15■□□□□ 0.82
TCF3-216ENST00000592395 PIRO00625 290 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 CALUO43852 315 aaPredicted RBP20.15■□□□□ 0.82
TCF3-216ENST00000592395 EXOC3O60645 756 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 PAX3P23760 479 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 TKTP29401 623 aaKnown RBP20.15■□□□□ 0.82
TCF3-216ENST00000592395 AARSP49588 968 aaKnown RBP eCLIP20.15■□□□□ 0.82
TCF3-216ENST00000592395 KCNQ1P51787 676 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 CLCN4P51793 760 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 TFAMQ00059 246 aaKnown RBP20.15■□□□□ 0.82
TCF3-216ENST00000592395 ZNF658Q5TYW1 1059 aaPredicted RBP20.15■□□□□ 0.82
TCF3-216ENST00000592395 C9orf57Q5W0N0 161 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 ANKS3Q6ZW76 656 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 RDH13Q8NBN7 331 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.15■□□□□ 0.82
TCF3-216ENST00000592395 ERCC4Q92889 916 aaPredicted RBP20.15■□□□□ 0.82
TCF3-216ENST00000592395 MAPK8IP1Q9UQF2 711 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 TRAF3IP3Q9Y228 551 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 UNC80Q8N2C7 3258 aa20.15■□□□□ 0.82
TCF3-216ENST00000592395 C1RP00736 705 aa20.14■□□□□ 0.81
TCF3-216ENST00000592395 NR3C1P04150 777 aa20.14■□□□□ 0.81
TCF3-216ENST00000592395 HOXB8P17481 243 aaPredicted RBP20.14■□□□□ 0.81
TCF3-216ENST00000592395 MYBPC2Q14324 1141 aa20.14■□□□□ 0.81
TCF3-216ENST00000592395 ANKRD54Q6NXT1 300 aa20.14■□□□□ 0.81
TCF3-216ENST00000592395 DZANK1Q9NVP4 752 aa20.14■□□□□ 0.81
TCF3-216ENST00000592395 DMAC2Q9NW81 257 aa20.14■□□□□ 0.81
TCF3-216ENST00000592395 SCN1AP35498 2009 aa20.14■□□□□ 0.81
TCF3-216ENST00000592395 M0QZQ0 153 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 PPEF2O14830 753 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 GLUD1P00367 558 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 TMEM191BP0C7N4 346 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 BMP1P13497 986 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 EPCAMP16422 314 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 RPL17P18621 184 aaKnown RBP20.13■□□□□ 0.81
TCF3-216ENST00000592395 LILRA4P59901 499 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 CYP24A1Q07973 514 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 SMAD4Q13485 552 aaKnown RBP20.13■□□□□ 0.81
TCF3-216ENST00000592395 PSMD6Q15008 389 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 CLUL1Q15846 466 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 NFIL3Q16649 462 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 COBLL1Q53SF7 1204 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 PTCRAQ6ISU1 281 aaPredicted RBP20.13■□□□□ 0.81
TCF3-216ENST00000592395 WDR49Q8IV35 697 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 SMYD4Q8IYR2 804 aaPredicted RBP20.13■□□□□ 0.81
TCF3-216ENST00000592395 SMRP1Q8NCR6 262 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 APPL2Q8NEU8 664 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 ANKRD36BP1Q96IX9 119 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 INTS13Q9NVM9 706 aa20.13■□□□□ 0.81
TCF3-216ENST00000592395 MTRRQ9UBK8 725 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms