RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 TUBA3EQ6PEY2 450 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 ZNF365Q70YC5 407 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 GGNQ86UU5 652 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 FAM90A1Q86YD7 464 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 PLBD2Q8NHP8 589 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 KLHDC4Q8TBB5 520 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 SLC25A43Q8WUT9 341 aaPredicted RBP4.4□□□□□ -1.71
VMP1-212ENST00000591782 SLC35A4Q96G79 324 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 PSMD1Q99460 953 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 ZSWIM1Q9BR11 485 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 LRFN3Q9BTN0 628 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 SLC46A2Q9BY10 475 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 REXO4Q9GZR2 422 aaKnown RBP4.4□□□□□ -1.71
VMP1-212ENST00000591782 VPS11Q9H270 941 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 WDCPQ9H6R7 721 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 ARMT1Q9H993 441 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 SLAMF7Q9NQ25 335 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 SLC2A4RGQ9NR83 387 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 KLHL11Q9NVR0 708 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 PNPOQ9NVS9 261 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 SIDT1Q9NXL6 827 aaKnown RBP4.4□□□□□ -1.71
VMP1-212ENST00000591782 JKAMPQ9P055 326 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 GABBR1Q9UBS5 961 aa4.4□□□□□ -1.71
VMP1-212ENST00000591782 VSTM5A8MXK1 200 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 H3BUI4 141 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 B3GALT2O43825 422 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 CTNND1O60716 968 aaKnown RBP4.39□□□□□ -1.71
VMP1-212ENST00000591782 ELANEP08246 267 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 ATF3P18847 181 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 TNFRSF1AP19438 455 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 HTR1BP28222 390 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 IL12RB1P42701 662 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 PIK3CGP48736 1102 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 OCA2Q04671 838 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 LSM12Q3MHD2 195 aaKnown RBP4.39□□□□□ -1.71
VMP1-212ENST00000591782 ARHGAP29Q52LW3 1261 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 FNDC7Q5VTL7 733 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 LRRC55Q6ZSA7 311 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 OVCH2Q7RTZ1 564 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 PPP1R3BQ86XI6 285 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 TMIEQ8NEW7 156 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 TTC8Q8TAM2 541 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 NUP133Q8WUM0 1156 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 TNPO1Q92973 898 aaKnown RBP4.39□□□□□ -1.71
VMP1-212ENST00000591782 MARS2Q96GW9 593 aaKnown RBP4.39□□□□□ -1.71
VMP1-212ENST00000591782 CDK5RAP3Q96JB5 506 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 FAM167AQ96KS9 214 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 MRPL46Q9H2W6 279 aaKnown RBP4.39□□□□□ -1.71
VMP1-212ENST00000591782 AKIP1Q9NQ31 210 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 GPRC5BQ9NZH0 403 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 USP25Q9UHP3 1055 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 MAP3K2Q9Y2U5 619 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 PCDHA1Q9Y5I3 950 aa4.39□□□□□ -1.71
VMP1-212ENST00000591782 A0A1B0GTW7 788 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 GOLGA6CA6NDK9 693 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 GOLGA6BA6NDN3 693 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 PRSS29PA6NIE9 313 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 RNASET2O00584 256 aaKnown RBP4.38□□□□□ -1.71
VMP1-212ENST00000591782 ERC2O15083 957 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 MATN4O95460 622 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 AHSGP02765 367 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 GNAI3P08754 354 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 SPATA31D3P0C874 917 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 GOLGA6DP0CG33 693 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 FCER1AP12319 257 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 FGFR4P22455 802 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 RAB1AP62820 205 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 GNAI1P63096 354 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 GFOD2Q3B7J2 385 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 BEAN1Q3B7T3 259 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 IGFL4Q6B9Z1 124 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 SPATA31D4Q6ZUB0 917 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 TICAM2Q86XR7 235 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 COL23A1Q86Y22 540 aaPredicted RBP4.38□□□□□ -1.71
VMP1-212ENST00000591782 MAPKAPK5Q8IW41 473 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 KLHL32Q96NJ5 620 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 TLR10Q9BXR5 811 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 B3GNT5Q9BYG0 378 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 ZNF341Q9BYN7 854 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 RNPEPQ9H4A4 650 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 NRDE2Q9H7Z3 1164 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 BRD9Q9H8M2 597 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 GNL3LQ9NVN8 582 aaKnown RBP4.38□□□□□ -1.71
VMP1-212ENST00000591782 GOLGA6AQ9NYA3 693 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 STAP2Q9UGK3 403 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 DDX20Q9UHI6 824 aaKnown RBP4.38□□□□□ -1.71
VMP1-212ENST00000591782 REXO2Q9Y3B8 237 aaKnown RBP4.38□□□□□ -1.71
VMP1-212ENST00000591782 FPGT-TNNI3KV9GXZ4 949 aa4.38□□□□□ -1.71
VMP1-212ENST00000591782 ARID4BQ4LE39 1312 aaPredicted RBP4.38□□□□□ -1.71
VMP1-212ENST00000591782 A0A088AWK7 358 aa4.37□□□□□ -1.71
VMP1-212ENST00000591782 GAGE12BA1L429 117 aa4.37□□□□□ -1.71
VMP1-212ENST00000591782 GAGE12HA6NDE8 117 aa4.37□□□□□ -1.71
VMP1-212ENST00000591782 MARCH11A6NNE9 402 aa4.37□□□□□ -1.71
VMP1-212ENST00000591782 A6NNZ2 444 aa4.37□□□□□ -1.71
VMP1-212ENST00000591782 ZNF785A8K8V0 405 aa4.37□□□□□ -1.71
VMP1-212ENST00000591782 NPIPB8E9PQR5 432 aa4.37□□□□□ -1.71
VMP1-212ENST00000591782 TUSC2O75896 110 aa4.37□□□□□ -1.71
VMP1-212ENST00000591782 NDUFA10O95299 355 aa4.37□□□□□ -1.71
VMP1-212ENST00000591782 GPANK1O95872 356 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms