RNA–Protein interactions for RNA: ENST00000591545.5

SMARCA4-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 5,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-216ENST00000591545 ATN1P54259 1190 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 SNRPFP62306 86 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 HEMGNQ9BXL5 484 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 SPATC1LQ9H0A9 340 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 DHX35Q9H5Z1 703 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 ZNF212Q9UDV6 495 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 FBXL5Q9UKA1 691 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 SSU72P8A0A1W2PR75 194 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 GOLGA8MH3BSY2 632 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 PGK2P07205 417 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 TRIM9Q9C026 710 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 PCDHB8Q9UN66 801 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 WNT10BO00744 389 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 SNX2O60749 519 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 E2F6O75461 281 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 LRG1P02750 347 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 FTLP02792 175 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 RPA1P27694 616 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 NOP14P78316 857 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 EFTUD2Q15029 972 aaKnown RBP eCLIP14.01□□□□□ -0.172e-7■■■■□ 25.9
SMARCA4-216ENST00000591545 DDX53Q86TM3 631 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 ICA1LQ8NDH6 482 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 GMCL1P1Q8NEA9 526 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 ALKBH8Q96BT7 664 aaKnown RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 MED15Q96RN5 788 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 REEP2Q9BRK0 252 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 FOXP3Q9BZS1 431 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 VPS11Q9H270 941 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 IL25Q9H293 177 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 ARL2BPQ9Y2Y0 163 aa14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 PRG3Q9Y2Y8 225 aaPredicted RBP14.01□□□□□ -0.17
SMARCA4-216ENST00000591545 CNTNAP5Q8WYK1 1306 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 A0A1B0GTH6 734 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 TEX33O43247 280 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 HOXA10P31260 410 aaPredicted RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 BCAR1P56945 870 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 ROR1Q01973 937 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 PPATQ06203 517 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 NCOA4Q13772 614 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 RARS2Q5T160 578 aaKnown RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 HEATR6Q6AI08 1181 aaKnown RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 SDE2Q6IQ49 451 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 RGS9BPQ6ZS82 235 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 NUDCD3Q8IVD9 361 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 CEP70Q8NHQ1 597 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 NCLNQ969V3 563 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 ZMAT2Q96NC0 199 aaKnown RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 C17orf75Q9HAS0 396 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 BFARQ9NZS9 450 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 ADM5C9JUS6 153 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 FKBP1AP62942 108 aaKnown RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 SHC4Q6S5L8 630 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 FRA10AC1Q70Z53 315 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 PPM1NQ8N819 430 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 CDCA5Q96FF9 252 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 TEX12Q9BXU0 123 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 KLC4Q9NSK0 619 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 WDR35Q9P2L0 1181 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 DDTLA6NHG4 134 aaPredicted RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 USP27XA6NNY8 438 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 SYCE1LA8MT33 242 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 MEFVO15553 781 aaPredicted RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 NPTXRO95502 500 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 SLC26A2P50443 739 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 DDR1Q08345 913 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 TXNRD3Q86VQ6 643 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 FAM161BQ96MY7 647 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 SLITRK1Q96PX8 696 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 KIAA1683Q9H0B3 1180 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 GTSE1Q9NYZ3 720 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 TEKT2Q9UIF3 430 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 TUBE1Q9UJT0 475 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 RASSF10A6NK89 507 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 ATP1A1P05023 1023 aaKnown RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 PDIA2Q13087 525 aaKnown RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 GPS1Q13098 491 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 IZUMO3Q5VZ72 239 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 GLYCTKQ8IVS8 523 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 GSPT2Q8IYD1 628 aaKnown RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 HIPK4Q8NE63 616 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 YME1L1Q96TA2 773 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 EPN3Q9H201 632 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 PLEKHA5Q9HAU0 1116 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 BATF3Q9NR55 127 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 MRGBPQ9NV56 204 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 WARS2Q9UGM6 360 aaKnown RBP14□□□□□ -0.17
SMARCA4-216ENST00000591545 ARHGAP26Q9UNA1 814 aa14□□□□□ -0.17
SMARCA4-216ENST00000591545 SALL1Q9NSC2 1324 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 NCK2O43639 380 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 RAG1P15918 1043 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 FGFR2P21802 821 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 MAPRE1Q15691 268 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 FKBP1CQ5VVH2 108 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 UBQLN1Q9UMX0 589 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 NR2E3Q9Y5X4 410 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 AP3B1O00203 1094 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 TMCC1O94876 653 aa13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 MDH1P40925 334 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 MRPS25P82663 173 aaKnown RBP13.99□□□□□ -0.17
SMARCA4-216ENST00000591545 NBPF20Q3BBV1 942 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms