RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 MICAL1Q8TDZ2 1067 aa17.33■□□□□ 0.36
PRKCSH-213ENST00000591510 BORCS6Q96GS4 357 aa17.33■□□□□ 0.36
PRKCSH-213ENST00000591510 CDCA3Q99618 268 aaPredicted RBP17.33■□□□□ 0.36
PRKCSH-213ENST00000591510 TTPALQ9BTX7 342 aa17.33■□□□□ 0.36
PRKCSH-213ENST00000591510 TLE6Q9H808 572 aa17.33■□□□□ 0.36
PRKCSH-213ENST00000591510 INTS13Q9NVM9 706 aa17.33■□□□□ 0.36
PRKCSH-213ENST00000591510 DPP3Q9NY33 737 aa17.33■□□□□ 0.36
PRKCSH-213ENST00000591510 VCANP13611 3396 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 BIN1O00499 593 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 PER2O15055 1255 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 MAPK13O15264 365 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 CALUO43852 315 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 TBC1D4O60343 1298 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 EXOC3O60645 756 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 TBX10O75333 385 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 AKAP3O75969 853 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 URODP06132 367 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 TKTP29401 623 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 DLX2Q07687 328 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 MRPL58Q14197 206 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 FAM171A1Q5VUB5 890 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 LMBRD2Q68DH5 695 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 ISM2Q6H9L7 571 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 TMEM184AQ6ZMB5 413 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 RBM43Q6ZSC3 357 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 RBM23Q86U06 439 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 WDR49Q8IV35 697 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 TRIML1Q8N9V2 468 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 RDH13Q8NBN7 331 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 LNX1Q8TBB1 728 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 PARD3BQ8TEW8 1205 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 SLC22A17Q8WUG5 538 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 KLHL5Q96PQ7 755 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 CGRRF1Q99675 332 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 MTMR12Q9C0I1 747 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 UBE2ZQ9H832 354 aaPredicted RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 MRPL17Q9NRX2 175 aaKnown RBP17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 CLEC1BQ9P126 229 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 FNIP2Q9P278 1114 aa17.32■□□□□ 0.36
PRKCSH-213ENST00000591510 NCOR1O75376 2440 aa17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 TEX28O15482 410 aa17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 NR2F2P24468 414 aa17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 LILRA4P59901 499 aa17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 TFAMQ00059 246 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 SURF1Q15526 300 aa17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 FOXR2Q6PJQ5 311 aa17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 PRSS55Q6UWB4 352 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 RIN2Q8WYP3 895 aaPredicted RBP17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 ZNF516Q92618 1163 aa17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 MSLNLQ96KJ4 702 aa17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 POP1Q99575 1024 aaKnown RBP17.31■□□□□ 0.36
PRKCSH-213ENST00000591510 C5orf42Q9H799 3197 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 TRIM49BA6NDI0 452 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 LRRIQ3A6PVS8 624 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 C2CD2LO14523 706 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 SYN3O14994 580 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 ADAM12O43184 909 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 NCK2O43639 380 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 CCNE1P24864 410 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 ANKRD40Q6AI12 368 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 TTI2Q6NXR4 508 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 RSPO2Q6UXX9 243 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 TMC2Q8TDI7 906 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 HLA-CQ95604 372 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 PPP2R3CQ969Q6 453 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 DHTKD1Q96HY7 919 aaPredicted RBP17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 MED15Q96RN5 788 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 DUSP9Q99956 384 aaKnown RBP17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 CLSTN3Q9BQT9 956 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 NUP62CLQ9H1M0 184 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 IGFLR1Q9H665 355 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 MTRRQ9UBK8 725 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 ITGA11Q9UKX5 1188 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 COG5Q9UP83 839 aa17.3■□□□□ 0.36
PRKCSH-213ENST00000591510 MTCL1Q9Y4B5 1905 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 GOLGA6L22H0YM25 854 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 TRAPPC3O43617 180 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 RPL17P18621 184 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 PAX3P23760 479 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 POLR2BP30876 1174 aaKnown RBP17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 MCM4P33991 863 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 CLCN4P51793 760 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 DLG4P78352 724 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 TFF2Q03403 129 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 LRRC63Q05C16 580 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 ENPEPQ07075 957 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 PSMD5Q16401 504 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 LILRA6Q6PI73 481 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 LIMS2Q7Z4I7 341 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 LRRC52Q8N7C0 313 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 CCDC127Q96BQ5 260 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 CLDND1Q9NY35 253 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 THEGQ9P2T0 379 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 PCDHB8Q9UN66 801 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 SSX2IPQ9Y2D8 614 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 HCFC2Q9Y5Z7 792 aa17.29■□□□□ 0.36
PRKCSH-213ENST00000591510 FSD2A1L4K1 749 aa17.28■□□□□ 0.36
PRKCSH-213ENST00000591510 PSMA7O14818 248 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms