RNA–Protein interactions for RNA: ENST00000590062.1

GPATCH1-202, Transcript of G-patch domain containing 1, humanhuman

TSL 2

Gene GPATCH1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH1-202ENST00000590062 ZNF516Q92618 1163 aa13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 ANKRD36BP1Q96IX9 119 aa13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 VN1R3Q9BXE9 311 aa13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 SRRTQ9BXP5 876 aaKnown RBP13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 DNAJC25Q9H1X3 360 aa13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 THAP9Q9H5L6 903 aa13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 ENTPD7Q9NQZ7 604 aa13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 ARMCX3Q9UH62 379 aaPredicted RBP13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 SIX4Q9UIU6 781 aa13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 ADAM28Q9UKQ2 775 aa13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 CHD7Q9P2D1 2997 aa13.18□□□□□ -0.3
GPATCH1-202ENST00000590062 SF3B1O75533 1304 aaKnown RBP eCLIP13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 F8W810 466 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 TADA2AO75478 443 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 B3GAT3O94766 335 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 CSPG5O95196 566 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 TNNC2P02585 160 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 C4BPAP04003 597 aaKnown RBP13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 POU3F3P20264 500 aaPredicted RBP13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 PNPLA4P41247 253 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 ELAVL2Q12926 359 aaKnown RBP13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 ADGRE1Q14246 886 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 ZACNQ401N2 412 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 ANO6Q4KMQ2 910 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 LMBRD2Q68DH5 695 aaPredicted RBP13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 FUT10Q6P4F1 479 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 TRAPPC11Q7Z392 1133 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 IRF2BP1Q8IU81 584 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 TRIM59Q8IWR1 403 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 GPR65Q8IYL9 337 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 MICALL1Q8N3F8 863 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 LRRC52Q8N7C0 313 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 MICAL1Q8TDZ2 1067 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 SLC35C1Q96A29 364 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 POP1Q99575 1024 aaKnown RBP13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 NAT10Q9H0A0 1025 aaKnown RBP13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 STXBP5LQ9Y2K9 1186 aa13.17□□□□□ -0.3
GPATCH1-202ENST00000590062 PPEF2O14830 753 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 FSCN2O14926 492 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 PMM2O15305 246 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 TRAPPC3O43617 180 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 STX10O60499 249 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 STAU1O95793 577 aaKnown RBP13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 CAVIN2O95810 425 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 SOD2P04179 222 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 ITGB3P05106 788 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 CA8P35219 290 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 RBP5P82980 135 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 MYL5Q02045 173 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 PPP3CAQ08209 521 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 CAMK1Q14012 370 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 NCAPHQ15003 741 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 CCDC40Q4G0X9 1142 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 TDRD10Q5VZ19 366 aaKnown RBP13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 TMC7Q7Z402 723 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 FAM114A1Q8IWE2 563 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 TMEM130Q8N3G9 435 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 RABGGTAQ92696 567 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 FAM84AQ96KN4 292 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 ZNF560Q96MR9 790 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 TCF25Q9BQ70 676 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 ZBP1Q9H171 429 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 NSUN3Q9H649 340 aaKnown RBP13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 NGRNQ9NPE2 291 aaKnown RBP13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 NFE2L3Q9Y4A8 694 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 MTCH2Q9Y6C9 303 aa13.16□□□□□ -0.3
GPATCH1-202ENST00000590062 FSD2A1L4K1 749 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 M0QZQ0 153 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 URODP06132 367 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 TRIM49P0CI25 452 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 TRIM49CP0CI26 452 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 IGFBP6P24592 240 aaPredicted RBP13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 DNAJB1P25685 340 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 POLR2BP30876 1174 aaKnown RBP13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 TAF6P49848 677 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 LILRA4P59901 499 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 SMC1AQ14683 1233 aaKnown RBP13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 TPD52L1Q16890 204 aaPredicted RBP13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 CDKAL1Q5VV42 579 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 PLPP4Q5VZY2 271 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 KIAA1841Q6NSI8 718 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 SV2AQ7L0J3 742 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 VPS52Q8N1B4 723 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 HASPINQ8TF76 798 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 SUSD3Q96L08 255 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 CNOT6LQ96LI5 555 aaKnown RBP13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 GPR62Q9BZJ7 368 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 VRTNQ9H8Y1 702 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 TMEM8AQ9HCN3 771 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 CHST7Q9NS84 486 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 SSX2IPQ9Y2D8 614 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 R3HCC1Q9Y3T6 440 aaKnown RBP13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 IRAK3Q9Y616 596 aa13.15□□□□□ -0.3
GPATCH1-202ENST00000590062 SZT2Q5T011 3432 aa13.14□□□□□ -0.31
GPATCH1-202ENST00000590062 SCN1AP35498 2009 aa13.14□□□□□ -0.31
GPATCH1-202ENST00000590062 SYN3O14994 580 aa13.14□□□□□ -0.31
GPATCH1-202ENST00000590062 SPTLC1O15269 473 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms