RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 ACAD10Q6JQN1 1059 aa15.45■□□□□ 0.06
RETREG3-208ENST00000589797 TEX2Q8IWB9 1127 aa15.45■□□□□ 0.06
RETREG3-208ENST00000589797 TSEN2Q8NCE0 465 aaKnown RBP15.45■□□□□ 0.06
RETREG3-208ENST00000589797 TMEM161BQ8NDZ6 487 aa15.45■□□□□ 0.06
RETREG3-208ENST00000589797 ASAP3Q8TDY4 903 aa15.45■□□□□ 0.06
RETREG3-208ENST00000589797 ATP8B4Q8TF62 1192 aa15.45■□□□□ 0.06
RETREG3-208ENST00000589797 HNRNPLLQ8WVV9 542 aaKnown RBP15.45■□□□□ 0.06
RETREG3-208ENST00000589797 SMYD2Q9NRG4 433 aa15.45■□□□□ 0.06
RETREG3-208ENST00000589797 UVRAGQ9P2Y5 699 aa15.45■□□□□ 0.06
RETREG3-208ENST00000589797 PRRC2BQ5JSZ5 2229 aaKnown RBP15.44■□□□□ 0.06
RETREG3-208ENST00000589797 GOLGB1Q14789 3259 aaKnown RBP15.44■□□□□ 0.06
RETREG3-208ENST00000589797 SPDYE16A6NNV3 312 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-208ENST00000589797 NPTXRO95502 500 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 BRAFP15056 766 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 SDC4P31431 198 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 P3H1Q32P28 736 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 WDR93Q6P2C0 686 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 C10orf88Q9H8K7 445 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 SETD4Q9NVD3 440 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 IP6K2Q9UHH9 426 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 MYO9BQ13459 2157 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 KLRG2A4D1S0 409 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-208ENST00000589797 HUS1O60921 280 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 MSH2P43246 934 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 ERVK-9P63128 1117 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 PDE1BQ01064 536 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 CACNB2Q08289 660 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-208ENST00000589797 CFAP157Q5JU67 520 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 HGSNATQ68CP4 663 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 CROCCP2Q86T23 111 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 SLC13A5Q86YT5 568 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-208ENST00000589797 P3H4Q92791 437 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 SIK2Q9H0K1 926 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 SLC4A1P02730 911 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 PHBP35232 272 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 ARL4AP40617 200 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 HSDL1Q3SXM5 330 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 FAXCQ5TGI0 409 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 ANKRD20A3Q5VUR7 823 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 CATSPERGQ6ZRH7 1159 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 LRRC8CQ8TDW0 803 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 TBC1D31Q96DN5 1066 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 ZSWIM1Q9BR11 485 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 GCOM2Q9BZD3 368 aaPredicted RBP15.44■□□□□ 0.06
RETREG3-208ENST00000589797 GTF3C4Q9UKN8 822 aa15.44■□□□□ 0.06
RETREG3-208ENST00000589797 NFKBIEO00221 500 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 FANCGO15287 622 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 CST8O60676 142 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 TOM1L1O75674 476 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 IRAK1P51617 712 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 TMEM132DQ14C87 1099 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 PRAMEF19Q5SWL8 479 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 RBM41Q96IZ5 413 aaKnown RBP15.43■□□□□ 0.06
RETREG3-208ENST00000589797 FAM193BQ96PV7 902 aaPredicted RBP15.43■□□□□ 0.06
RETREG3-208ENST00000589797 CARD9Q9H257 536 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 PDGFCQ9NRA1 345 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 OGTO15294 1046 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 CYP2C9P11712 490 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 ABCD1P33897 745 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 TNFSF9P41273 254 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 PTGER2P43116 358 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 C6orf118Q5T5N4 469 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 FYB2Q5VWT5 728 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 XRRA1Q6P2D8 792 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 SCN4BQ8IWT1 228 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 CCDC197Q8NCU1 140 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 BBOF1Q8ND07 529 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 BSNDQ8WZ55 320 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 KLRG1Q96E93 195 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 HPDLQ96IR7 371 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 CISHQ9NSE2 258 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 ZNF862O60290 1169 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 HBP1O60381 514 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 GH1P01241 217 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 BCAR1P56945 870 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 PPP2R2AP63151 447 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 GEN1Q17RS7 908 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 ATP13A4Q4VNC1 1196 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 FAM182AQ5T1J6 154 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 RWDD4Q6NW29 188 aaKnown RBP15.43■□□□□ 0.06
RETREG3-208ENST00000589797 PRUNE1Q86TP1 453 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 PLCD3Q8N3E9 789 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 OR5B17Q8NGF7 314 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 SENP7Q9BQF6 1050 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 NIF3L1Q9GZT8 377 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 HES2Q9Y543 173 aa15.43■□□□□ 0.06
RETREG3-208ENST00000589797 SLC26A4O43511 780 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 PHF2O75151 1096 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 ADCYAP1R1P41586 468 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 NAMPTP43490 491 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 METTL7BQ6UX53 244 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 KDELC2Q7Z4H8 507 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 NT5DC3Q86UY8 548 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 ATL2Q8NHH9 583 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 SEMA4DQ92854 862 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 OSMRQ99650 979 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 LBHD1Q9BQE6 289 aaPredicted RBP15.42■□□□□ 0.06
RETREG3-208ENST00000589797 XPOTO43592 962 aaKnown RBP15.42■□□□□ 0.06
RETREG3-208ENST00000589797 SLC25A27O95847 323 aa15.42■□□□□ 0.06
RETREG3-208ENST00000589797 AMPD2Q01433 879 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms