RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 CETN2P41208 172 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 SLC1A1P43005 524 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 EMP3P54852 163 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 TRADDQ15628 312 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 C1orf220Q5T0J3 134 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 NAA35Q5VZE5 725 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 DENND2CQ68D51 928 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 SV2AQ7L0J3 742 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 NOP9Q86U38 636 aaKnown RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 SLC47A2Q86VL8 602 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 APOBEC3FQ8IUX4 373 aaKnown RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 SH2D3CQ8N5H7 860 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 ATG4CQ96DT6 458 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 SAAL1Q96ER3 474 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 SH2D3AQ9BRG2 576 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 ACAD9Q9H845 621 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 CYP26B1Q9NR63 512 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 HOMER3Q9NSC5 361 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 COG5Q9UP83 839 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 ATP8A1Q9Y2Q0 1164 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 PASKQ96RG2 1323 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 A0A087WUV0 522 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 A0A1W2PRU2 124 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 ANKRD63C9JTQ0 380 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 TK2O00142 265 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 SCAMP3O14828 347 aaKnown RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 EXTL3O43909 919 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 FZD6O60353 706 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 MMEP08473 750 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 TNNI1P19237 187 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 CTNNA2P26232 953 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 HPDP32754 393 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 FNTAP49354 379 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 POLGP54098 1239 aaPredicted RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 POU5F1Q01860 360 aaKnown RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 CALCOCO2Q13137 446 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 PDCLQ13371 301 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 BYSLQ13895 437 aaKnown RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 STXBP2Q15833 593 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 KRT71Q3SY84 523 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 LIN9Q5TKA1 542 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 CCDC137Q6PK04 289 aaKnown RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 TRIM72Q6ZMU5 477 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 ATCAYQ86WG3 371 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 JAMLQ86YT9 394 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 OLIG1Q8TAK6 271 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 SLC7A3Q8WY07 619 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 OTUD5Q96G74 571 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 C12orf42Q96LP6 360 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 CELF4Q9BZC1 486 aaKnown RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 TRIM31Q9BZY9 425 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 PABPC3Q9H361 631 aaKnown RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 CNOT7Q9UIV1 285 aaKnown RBP7.91□□□□□ -1.14
ZNF540-206ENST00000589117 HACL1Q9UJ83 578 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 GGA2Q9UJY4 613 aa7.91□□□□□ -1.14
ZNF540-206ENST00000589117 H0YGN5 161 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 MYO1FO00160 1098 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 ADRB2P07550 413 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 PTPRAP18433 802 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 MAPK4P31152 587 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 PEX5P50542 639 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 PMS2P54278 862 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 PLTPP55058 493 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 PPP2R2AP63151 447 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 FMO1Q01740 532 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 SLC20A2Q08357 652 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 ZNF844Q08AG5 666 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 DSC3Q14574 896 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 C6orf118Q5T5N4 469 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 DCAF12L1Q5VU92 463 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 SYDE1Q6ZW31 735 aaPredicted RBP7.9□□□□□ -1.14
ZNF540-206ENST00000589117 CYFIP1Q7L576 1253 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 ADAT2Q7Z6V5 191 aaKnown RBP7.9□□□□□ -1.14
ZNF540-206ENST00000589117 BPHLQ86WA6 291 aaPredicted RBP7.9□□□□□ -1.14
ZNF540-206ENST00000589117 PALB2Q86YC2 1186 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 DNERQ8NFT8 737 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 GRK7Q8WTQ7 553 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 ALG3Q92685 438 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 KREMEN1Q96MU8 473 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 WRNIP1Q96S55 665 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 FAM213AQ9BRX8 229 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 MRPL47Q9HD33 250 aaKnown RBP7.9□□□□□ -1.14
ZNF540-206ENST00000589117 CNOT8Q9UFF9 292 aaKnown RBP7.9□□□□□ -1.14
ZNF540-206ENST00000589117 ZNF112Q9UJU3 913 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 NFS1Q9Y697 457 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 GRIN2DO15399 1336 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 MYPNQ86TC9 1320 aa7.9□□□□□ -1.14
ZNF540-206ENST00000589117 ATXN2Q99700 1313 aaKnown RBP7.9□□□□□ -1.14
ZNF540-206ENST00000589117 TMEM150BA6NC51 233 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 SPATA31C2B4DYI2 1134 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 K7ERI5 159 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 ECEL1O95672 775 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 FAM107AO95990 144 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 NUDT17P0C025 328 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 KCNA2P16389 499 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 CHRNB2P17787 502 aa7.9□□□□□ -1.15
ZNF540-206ENST00000589117 TBXAS1P24557 533 aaPredicted RBP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 NSFP46459 744 aaKnown RBP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 EIF1AXP47813 144 aaKnown RBP7.9□□□□□ -1.15
ZNF540-206ENST00000589117 EPHA4P54764 986 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms