RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 KLHL5Q96PQ7 755 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 TTPALQ9BTX7 342 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 GTPBP4Q9BZE4 634 aaKnown RBP21.87■■□□□ 1.09
DDX39A-207ENST00000588542 CLSTN2Q9H4D0 955 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 CLDND1Q9NY35 253 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 KIAA1468Q9P260 1216 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 SSX2IPQ9Y2D8 614 aa21.87■■□□□ 1.09
DDX39A-207ENST00000588542 TRAPPC3O43617 180 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 CD44P16070 742 aaKnown RBP21.86■■□□□ 1.09
DDX39A-207ENST00000588542 TKTP29401 623 aaKnown RBP21.86■■□□□ 1.09
DDX39A-207ENST00000588542 AARSP49588 968 aaKnown RBP eCLIP21.86■■□□□ 1.092e-6■■■■■ 30.9
DDX39A-207ENST00000588542 TFAMQ00059 246 aaKnown RBP21.86■■□□□ 1.09
DDX39A-207ENST00000588542 TFF2Q03403 129 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 DLX2Q07687 328 aaPredicted RBP21.86■■□□□ 1.09
DDX39A-207ENST00000588542 PSMD6Q15008 389 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 SURF1Q15526 300 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 LMBRD2Q68DH5 695 aaPredicted RBP21.86■■□□□ 1.09
DDX39A-207ENST00000588542 SCARA3Q6AZY7 606 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 CENPPQ6IPU0 288 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 KIAA1841Q6NSI8 718 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 PRSS55Q6UWB4 352 aaPredicted RBP21.86■■□□□ 1.09
DDX39A-207ENST00000588542 CEP57Q86XR8 500 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 C1orf127Q8N9H9 656 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 CXorf38Q8TB03 319 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 LNX1Q8TBB1 728 aaPredicted RBP21.86■■□□□ 1.09
DDX39A-207ENST00000588542 GPT2Q8TD30 523 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 PLEKHO2Q8TD55 490 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 PIK3R5Q8WYR1 880 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 INTS13Q9NVM9 706 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 THEGQ9P2T0 379 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 NUB1Q9Y5A7 615 aa21.86■■□□□ 1.09
DDX39A-207ENST00000588542 TULP1O00294 542 aaPredicted RBP21.85■■□□□ 1.09
DDX39A-207ENST00000588542 BIN1O00499 593 aa21.85■■□□□ 1.09
DDX39A-207ENST00000588542 TEX28O15482 410 aa21.85■■□□□ 1.09
DDX39A-207ENST00000588542 TBX10O75333 385 aa21.85■■□□□ 1.09
DDX39A-207ENST00000588542 OR5B17Q8NGF7 314 aa21.85■■□□□ 1.09
DDX39A-207ENST00000588542 SLC22A17Q8WUG5 538 aa21.85■■□□□ 1.09
DDX39A-207ENST00000588542 CACTINQ8WUQ7 758 aaKnown RBP21.85■■□□□ 1.09
DDX39A-207ENST00000588542 EMILIN2Q9BXX0 1053 aa21.85■■□□□ 1.09
DDX39A-207ENST00000588542 FNIP2Q9P278 1114 aa21.85■■□□□ 1.09
DDX39A-207ENST00000588542 FSD2A1L4K1 749 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 M0QZQ0 153 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 SPTLC1O15269 473 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 NR2F2P24468 414 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 MCM4P33991 863 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 LILRA4P59901 499 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 TMEM184AQ6ZMB5 413 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 WDR49Q8IV35 697 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 POP1Q99575 1024 aaKnown RBP21.84■■□□□ 1.09
DDX39A-207ENST00000588542 CGRRF1Q99675 332 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 MTMR12Q9C0I1 747 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.84■■□□□ 1.09
DDX39A-207ENST00000588542 CLEC1BQ9P126 229 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 HCFC2Q9Y5Z7 792 aa21.84■■□□□ 1.09
DDX39A-207ENST00000588542 PPP1R3GB7ZBB8 358 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 GOLGA6L22H0YM25 854 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 SYN3O14994 580 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 ITGB3P05106 788 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 RPL17P18621 184 aaKnown RBP21.83■■□□□ 1.09
DDX39A-207ENST00000588542 KCNA5P22460 613 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 CLCN4P51793 760 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 PMS1P54277 932 aaKnown RBP21.83■■□□□ 1.09
DDX39A-207ENST00000588542 PSMD5Q16401 504 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 EDRF1Q3B7T1 1238 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 LLGL2Q6P1M3 1020 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 EP400NLQ6ZTU2 488 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 PHF6Q8IWS0 365 aaKnown RBP eCLIP21.83■■□□□ 1.09
DDX39A-207ENST00000588542 PARD3BQ8TEW8 1205 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 ZNF516Q92618 1163 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 CCDC127Q96BQ5 260 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 MSLNLQ96KJ4 702 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 CLSTN3Q9BQT9 956 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 SIX4Q9UIU6 781 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 BARX2Q9UMQ3 279 aaPredicted RBP21.83■■□□□ 1.09
DDX39A-207ENST00000588542 PCDHB8Q9UN66 801 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 C5orf42Q9H799 3197 aa21.83■■□□□ 1.09
DDX39A-207ENST00000588542 H3BQ06 376 aaPredicted RBP21.82■■□□□ 1.08
DDX39A-207ENST00000588542 AKAP3O75969 853 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 TMEM191BP0C7N4 346 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 DLATP10515 647 aaKnown RBP21.82■■□□□ 1.08
DDX39A-207ENST00000588542 EPCAMP16422 314 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 KLRC2P26717 231 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 POLR2BP30876 1174 aaKnown RBP21.82■■□□□ 1.08
DDX39A-207ENST00000588542 NDUFV1P49821 464 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 ADAM9Q13443 819 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 MRPL58Q14197 206 aaKnown RBP21.82■■□□□ 1.08
DDX39A-207ENST00000588542 DUOXA2Q1HG44 320 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 CEP135Q66GS9 1140 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 ANKRD40Q6AI12 368 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 TRIML1Q8N9V2 468 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 BORCS6Q96GS4 357 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 ANKRD36BP1Q96IX9 119 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 FNBP1Q96RU3 617 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 MTRRQ9UBK8 725 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 ITGA11Q9UKX5 1188 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 AGAP1Q9UPQ3 857 aa21.82■■□□□ 1.08
DDX39A-207ENST00000588542 TCF20Q9UGU0 1960 aaKnown RBP21.81■■□□□ 1.08
DDX39A-207ENST00000588542 TRIM49BA6NDI0 452 aa21.81■■□□□ 1.08
DDX39A-207ENST00000588542 LRRIQ3A6PVS8 624 aaPredicted RBP21.81■■□□□ 1.08
DDX39A-207ENST00000588542 MAPK13O15264 365 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms