RNA–Protein interactions for RNA: ENST00000588009.1

TUBD1-208, Transcript of tubulin delta 1, humanhuman

TSL 3

Gene TUBD1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-208ENST00000588009 PDIA3P30101 505 aaKnown RBP6.53□□□□□ -1.36
TUBD1-208ENST00000588009 PHKA1P46020 1223 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 RRADP55042 308 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 NOMO3P69849 1222 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 APBA1Q02410 837 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 SLC13A2Q13183 592 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 FZD5Q13467 585 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 KIF22Q14807 665 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 ACAP1Q15027 740 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 MFSD14BQ5SR56 506 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 KRT40Q6A162 431 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 TBC1D20Q96BZ9 403 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 YTHDC1Q96MU7 727 aaKnown RBP6.53□□□□□ -1.36
TUBD1-208ENST00000588009 PPP1R16BQ96T49 567 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 MYOCQ99972 504 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 ZNF518BQ9C0D4 1074 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 KCNH6Q9H252 994 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 SLC6A15Q9H2J7 730 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.53□□□□□ -1.36
TUBD1-208ENST00000588009 SRRDQ9UH36 339 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 ZMYM3Q14202 1370 aa6.53□□□□□ -1.36
TUBD1-208ENST00000588009 GOLGA6L3A6NEY3 463 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 ZNF888P0CJ79 500 aaPredicted RBP6.52□□□□□ -1.37
TUBD1-208ENST00000588009 CSF2RBP32927 897 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 PPFIA1Q13136 1202 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 CTBP1Q13363 440 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 HABP2Q14520 560 aaPredicted RBP6.52□□□□□ -1.37
TUBD1-208ENST00000588009 USP10Q14694 798 aaKnown RBP6.52□□□□□ -1.37
TUBD1-208ENST00000588009 GAGE13Q4V321 117 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 MMS22LQ6ZRQ5 1243 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 SEM1Q6ZVN7 128 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 USP30Q70CQ3 517 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 TMEFF1Q8IYR6 380 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 ANKRD53Q8N9V6 530 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 TEX19Q8NA77 164 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 OR5M3Q8NGP4 307 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 GCC1Q96CN9 775 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 CEP95Q96GE4 821 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 SPATA25Q9BR10 227 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 ENKD1Q9H0I2 346 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 BRD9Q9H8M2 597 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.52□□□□□ -1.37
TUBD1-208ENST00000588009 SLC23A1Q9UHI7 598 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 PGAP2Q9UHJ9 254 aa6.52□□□□□ -1.37
TUBD1-208ENST00000588009 CARMIL2Q6F5E8 1435 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 HNRNPDLO14979 420 aaKnown RBP6.51□□□□□ -1.37
TUBD1-208ENST00000588009 THAP12O43422 761 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 SLC26A4O43511 780 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 SLC43A1O75387 559 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 SASH1O94885 1247 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 GJB1P08034 283 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 GNAI3P08754 354 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 GNAI1P63096 354 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 ADAM8P78325 824 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 PTH1RQ03431 593 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 GALNT1Q10472 559 aaPredicted RBP6.51□□□□□ -1.37
TUBD1-208ENST00000588009 GRM1Q13255 1194 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 PFKFB4Q16877 469 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 ZACNQ401N2 412 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 SLC44A4Q53GD3 710 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 LVRNQ6Q4G3 990 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 UNC13DQ70J99 1090 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 FRMD5Q7Z6J6 570 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 CMTM4Q8IZR5 234 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 CACNA2D3Q8IZS8 1091 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 SDR16C5Q8N3Y7 309 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 FANCBQ8NB91 859 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 C18orf8Q96DM3 657 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 LTV1Q96GA3 475 aaPredicted RBP6.51□□□□□ -1.37
TUBD1-208ENST00000588009 RPL10LQ96L21 214 aaKnown RBP6.51□□□□□ -1.37
TUBD1-208ENST00000588009 RMDN3Q96TC7 470 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 MRI1Q9BV20 369 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 PACSIN1Q9BY11 444 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 TMEM168Q9H0V1 697 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 JADE2Q9NQC1 790 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 TERF2IPQ9NYB0 399 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 FAM53CQ9NYF3 392 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.51□□□□□ -1.37
TUBD1-208ENST00000588009 CFAP97Q9P2B7 532 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 SLC39A10Q9ULF5 831 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 MAN2B2Q9Y2E5 1009 aa6.51□□□□□ -1.37
TUBD1-208ENST00000588009 ARID1BQ8NFD5 2236 aaPredicted RBP6.51□□□□□ -1.37
TUBD1-208ENST00000588009 TCRBV7S2A1N4TA0A589 114 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 M0R3H8 397 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 AREL1O15033 823 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 KIAA0391O15091 583 aaKnown RBP6.5□□□□□ -1.37
TUBD1-208ENST00000588009 ATP5JP18859 108 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 GZMKP49863 264 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 DLG4P78352 724 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 HGFACQ04756 655 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 DLX2Q07687 328 aaPredicted RBP6.5□□□□□ -1.37
TUBD1-208ENST00000588009 RAB32Q13637 225 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 TBR1Q16650 682 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 ZMAT1Q5H9K5 638 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 LMBRD2Q68DH5 695 aaPredicted RBP6.5□□□□□ -1.37
TUBD1-208ENST00000588009 CATSPERGQ6ZRH7 1159 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 RNF44Q7L0R7 432 aa6.5□□□□□ -1.37
TUBD1-208ENST00000588009 PCSK9Q8NBP7 692 aaKnown RBP6.5□□□□□ -1.37
TUBD1-208ENST00000588009 OR14K1Q8NGZ2 314 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms