RNA–Protein interactions for RNA: ENST00000586796.1

RETREG3-204, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-204ENST00000586796 EDRF1Q3B7T1 1238 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 RTP2Q5QGT7 225 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 CSGALNACT2Q8N6G5 542 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 TMEM174Q8WUU8 243 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 NELFBQ8WX92 580 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 TTPALQ9BTX7 342 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 PRDM6Q9NQX0 595 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 CHST7Q9NS84 486 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 INTS13Q9NVM9 706 aa23.19■■□□□ 1.3
RETREG3-204ENST00000586796 ATG2AQ2TAZ0 1938 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 AKAP3O75969 853 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 TNNC2P02585 160 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 TKTP29401 623 aaKnown RBP23.18■■□□□ 1.3
RETREG3-204ENST00000586796 POLR2BP30876 1174 aaKnown RBP23.18■■□□□ 1.3
RETREG3-204ENST00000586796 STX17P56962 302 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 DSG1Q02413 1049 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 DUOXA2Q1HG44 320 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 KIAA0319Q5VV43 1072 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 SCARA3Q6AZY7 606 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 PRSS55Q6UWB4 352 aaPredicted RBP23.18■■□□□ 1.3
RETREG3-204ENST00000586796 WDR49Q8IV35 697 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 C1orf127Q8N9H9 656 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 PLEKHO2Q8TD55 490 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 CGRRF1Q99675 332 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 AGAP1Q9UPQ3 857 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 SSX2IPQ9Y2D8 614 aa23.18■■□□□ 1.3
RETREG3-204ENST00000586796 ANO9A1A5B4 782 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 PIRO00625 290 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 CETN3O15182 167 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 LINC01565O15544 149 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 LRRC63Q05C16 580 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 DUSP6Q16828 381 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 LLGL2Q6P1M3 1020 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 DSTYKQ6XUX3 929 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.17■■□□□ 1.3
RETREG3-204ENST00000586796 GLYCTKQ8IVS8 523 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 FAM186BQ8IYM0 893 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 EMILIN2Q9BXX0 1053 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 CLDND1Q9NY35 253 aa23.17■■□□□ 1.3
RETREG3-204ENST00000586796 R3HCC1Q9Y3T6 440 aaKnown RBP23.17■■□□□ 1.3
RETREG3-204ENST00000586796 LRRIQ3A6PVS8 624 aaPredicted RBP23.16■■□□□ 1.3
RETREG3-204ENST00000586796 CNPP09543 421 aaKnown RBP23.16■■□□□ 1.3
RETREG3-204ENST00000586796 RPL17P18621 184 aaKnown RBP23.16■■□□□ 1.3
RETREG3-204ENST00000586796 PSMC2P35998 433 aaKnown RBP23.16■■□□□ 1.3
RETREG3-204ENST00000586796 DLG4P78352 724 aa23.16■■□□□ 1.3
RETREG3-204ENST00000586796 PAK1Q13153 545 aa23.16■■□□□ 1.3
RETREG3-204ENST00000586796 PARD3BQ8TEW8 1205 aa23.16■■□□□ 1.3
RETREG3-204ENST00000586796 ZNF516Q92618 1163 aa23.16■■□□□ 1.3
RETREG3-204ENST00000586796 SUSD3Q96L08 255 aa23.16■■□□□ 1.3
RETREG3-204ENST00000586796 KLHL5Q96PQ7 755 aa23.16■■□□□ 1.3
RETREG3-204ENST00000586796 GZF1Q9H116 711 aaPredicted RBP23.16■■□□□ 1.3
RETREG3-204ENST00000586796 ITGA11Q9UKX5 1188 aa23.16■■□□□ 1.3
RETREG3-204ENST00000586796 IRAK3Q9Y616 596 aa23.16■■□□□ 1.3
RETREG3-204ENST00000586796 SPTLC1O15269 473 aa23.15■■□□□ 1.3
RETREG3-204ENST00000586796 LILRB3O75022 631 aa23.15■■□□□ 1.3
RETREG3-204ENST00000586796 CLASP2O75122 1294 aaKnown RBP23.15■■□□□ 1.3
RETREG3-204ENST00000586796 KRT13P13646 458 aa23.15■■□□□ 1.3
RETREG3-204ENST00000586796 FGFR3P22607 806 aa23.15■■□□□ 1.3
RETREG3-204ENST00000586796 KLRC2P26717 231 aa23.15■■□□□ 1.3
RETREG3-204ENST00000586796 LILRA4P59901 499 aa23.15■■□□□ 1.3
RETREG3-204ENST00000586796 RBP5P82980 135 aa23.15■■□□□ 1.3
RETREG3-204ENST00000586796 RBM10P98175 930 aaKnown RBP23.15■■□□□ 1.3
RETREG3-204ENST00000586796 FKBP3Q00688 224 aaKnown RBP23.15■■□□□ 1.3
RETREG3-204ENST00000586796 TIMM13Q9Y5L4 95 aaPredicted RBP23.15■■□□□ 1.3
RETREG3-204ENST00000586796 BICDL2A1A5D9 508 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 TEX28O15482 410 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 EPB41P11171 864 aaKnown RBP23.14■■□□□ 1.29
RETREG3-204ENST00000586796 TAF6P49848 677 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 VAMP7P51809 220 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 NLRP12P59046 1061 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 BFSP1Q12934 665 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 PSMD5Q16401 504 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 CCDC183Q5T5S1 534 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 TRAPPC11Q7Z392 1133 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 LNX1Q8TBB1 728 aaPredicted RBP23.14■■□□□ 1.29
RETREG3-204ENST00000586796 SENP8Q96LD8 212 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 ZNF560Q96MR9 790 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 CDCA3Q99618 268 aaPredicted RBP23.14■■□□□ 1.29
RETREG3-204ENST00000586796 DUSP9Q99956 384 aaKnown RBP23.14■■□□□ 1.29
RETREG3-204ENST00000586796 SIX4Q9UIU6 781 aa23.14■■□□□ 1.29
RETREG3-204ENST00000586796 MAPK13O15264 365 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 PHACTR2O75167 634 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 TRIM49P0CI25 452 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 TRIM49CP0CI26 452 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 BIRC3Q13489 604 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 DPCR1Q3MIW9 517 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 SV2CQ496J9 727 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 TTI2Q6NXR4 508 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 INTS8Q75QN2 995 aaKnown RBP23.13■■□□□ 1.29
RETREG3-204ENST00000586796 EFHBQ8N7U6 833 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 MLKLQ8NB16 471 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 TMC2Q8TDI7 906 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 PIK3R5Q8WYR1 880 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 HLA-CQ95604 372 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 MMRN2Q9H8L6 949 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 RXFP1Q9HBX9 757 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.13■■□□□ 1.29
RETREG3-204ENST00000586796 PCDHB8Q9UN66 801 aa23.13■■□□□ 1.29
RETREG3-204ENST00000586796 MYO7AQ13402 2215 aa23.12■■□□□ 1.29
RETREG3-204ENST00000586796 M0QZQ0 153 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms