RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 HTR1BP28222 390 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 SMARCA1P28370 1054 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 FLYWCH1Q4VC44 716 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 ARHGAP29Q52LW3 1261 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 FAM102AQ5T9C2 384 aaPredicted RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 RNF207Q6ZRF8 634 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 MED25Q71SY5 747 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 C1orf210Q8IVY1 113 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 KLHDC4Q8TBB5 520 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 CDK5RAP3Q96JB5 506 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 PHACTR3Q96KR7 559 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 FAM167AQ96KS9 214 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 C8orf48Q96LL4 319 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 PACSIN1Q9BY11 444 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 GSTO2Q9H4Y5 243 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 C1orf112Q9NSG2 853 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 CEP72Q9P209 647 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 DDX20Q9UHI6 824 aaKnown RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 FEZ2Q9UHY8 353 aaPredicted RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 EIF2B4Q9UI10 523 aaKnown RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 CDHR4A6H8M9 788 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 TRIM24O15164 1050 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 SLC43A1O75387 559 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 TUSC2O75896 110 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 PRSS23O95084 383 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 PRDX5P30044 214 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 RNASE9P60153 205 aaKnown RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 NKX6-1P78426 367 aaPredicted RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 PLS1Q14651 629 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 CCDC157Q569K6 752 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 RABL3Q5HYI8 236 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 AGAP9Q5VTM2 703 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 FAM90A1Q86YD7 464 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 ZFPM1Q8IX07 1006 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 NLGN4YQ8NFZ3 816 aaPredicted RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 PLBD2Q8NHP8 589 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 SLC35A4Q96G79 324 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 WDCPQ9H6R7 721 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 ZNF703Q9H7S9 590 aaPredicted RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 SIDT1Q9NXL6 827 aaKnown RBP3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 OBP2AQ9NY56 170 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 JKAMPQ9P055 326 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 SORCS3Q9UPU3 1222 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 CHST2Q9Y4C5 530 aa3.16□□□□□ -1.9
RPRD1A-204ENST00000585953 A6NNZ2 444 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 AHRRA9YTQ3 701 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 ZNF185O15231 689 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 SCAF4O95104 1147 aaKnown RBP3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 RAB1AP62820 205 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 GBX1Q14549 363 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 GRM3Q14832 879 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 NRN1LQ496H8 165 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 CCDC93Q567U6 631 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 ZNF365Q70YC5 407 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 RHOT2Q8IXI1 618 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 SH2D3CQ8N5H7 860 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 FITM2Q8N6M3 262 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 DCLRE1CQ96SD1 692 aaKnown RBP3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 C1orf43Q9BWL3 253 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 TMEM60Q9H2L4 133 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 PNPOQ9NVS9 261 aa3.15□□□□□ -1.9
RPRD1A-204ENST00000585953 WDR97A6NE52 1622 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 DIP2BQ9P265 1576 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 PTPRTO14522 1441 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 DIRC3C9JPN6 131 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 FAM227AF5H4B4 570 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 H3BUI4 141 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 FAM20BO75063 409 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 RECQL4O94761 1208 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 GCSHP23434 173 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 PIK3CGP48736 1102 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 AGFG1P52594 562 aaKnown RBP3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 SLC25A3Q00325 362 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 HSP90AB2PQ58FF8 381 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 GDF7Q7Z4P5 450 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 SPRED1Q7Z699 444 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 PPP1R3BQ86XI6 285 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 TBC1D15Q8TC07 691 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 CPT1CQ8TCG5 803 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 SH3RF3Q8TEJ3 882 aaPredicted RBP3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 CACTINQ8WUQ7 758 aaKnown RBP3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 MTFMTQ96DP5 389 aaKnown RBP3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 TEX101Q9BY14 249 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 B3GNT5Q9BYG0 378 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 MRPL46Q9H2W6 279 aaKnown RBP3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 ARMT1Q9H993 441 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 PRDM11Q9NQV5 511 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 GNL3LQ9NVN8 582 aaKnown RBP3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 PARPBPQ9NWS1 579 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 TRPM5Q9NZQ8 1165 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 SLC45A2Q9UMX9 530 aa3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 USP15Q9Y4E8 981 aaPredicted RBP3.15□□□□□ -1.91
RPRD1A-204ENST00000585953 A0A088AWK7 358 aa3.14□□□□□ -1.91
RPRD1A-204ENST00000585953 AGFG2O95081 481 aa3.14□□□□□ -1.91
RPRD1A-204ENST00000585953 MATN4O95460 622 aa3.14□□□□□ -1.91
RPRD1A-204ENST00000585953 C1SP09871 688 aa3.14□□□□□ -1.91
RPRD1A-204ENST00000585953 NOMO3P69849 1222 aa3.14□□□□□ -1.91
RPRD1A-204ENST00000585953 SLFN5Q08AF3 891 aa3.14□□□□□ -1.91
RPRD1A-204ENST00000585953 GALEQ14376 348 aa3.14□□□□□ -1.91
RPRD1A-204ENST00000585953 ANO6Q4KMQ2 910 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms