RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 WDR5P61964 334 aaKnown RBP17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ZBED6P86452 979 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 APBA1Q02410 837 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 TUSC3Q13454 348 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ARID5BQ14865 1188 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 NOMO2Q5JPE7 1267 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 C9orf57Q5W0N0 161 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ENOSF1Q7L5Y1 443 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 CACNA2D4Q7Z3S7 1137 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 NIF3L1Q9GZT8 377 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 INPP5FQ9Y2H2 1132 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 SCN1AP35498 2009 aa17.99■□□□□ 0.47
CDK5RAP3-230ENST00000584042 AKR1B15C9JRZ8 316 aaPredicted RBP17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PIRO00625 290 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ACRP10323 421 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 TBXAS1P24557 533 aaPredicted RBP17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 AFF1P51825 1210 aaKnown RBP17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 IQCEQ6IPM2 695 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PHLDB3Q6NSJ2 640 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ARHGEF19Q8IW93 802 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PPM1KQ8N3J5 372 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 TC2NQ8N9U0 490 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 BAP1Q92560 729 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 UROC1Q96N76 676 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PI4K2AQ9BTU6 479 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 NUCKS1Q9H1E3 243 aaKnown RBP17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 APOBEC3GQ9HC16 384 aaKnown RBP17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 TBC1D13Q9NVG8 400 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 MIOSQ9NXC5 875 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 AJAP1Q9UKB5 411 aaPredicted RBP17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 AGAP1Q9UPQ3 857 aa17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 LUC7L2Q9Y383 392 aaKnown RBP17.98■□□□□ 0.47
CDK5RAP3-230ENST00000584042 CST3P01034 146 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 POMCP01189 267 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PTMAP06454 111 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 RPL9P32969 192 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 KCNJ6P48051 423 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 JAM2P57087 298 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 DSC1Q08554 894 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 MYO1EQ12965 1108 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ZNF667Q5HYK9 610 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 SPOPLQ6IQ16 392 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PDXDC1Q6P996 788 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 CCDC186Q7Z3E2 898 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 FMNL3Q8IVF7 1028 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 LRRC43Q8N309 656 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ZNF397Q8NF99 534 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 JAKMIP2Q96AA8 810 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 CASD1Q96PB1 797 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 SPAG5Q96R06 1193 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 DNAJC7Q99615 494 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 FAM124BQ9H5Z6 455 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 GOLGA2P5Q9HBQ8 144 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 DNAJC12Q9UKB3 198 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ZMYND8Q9ULU4 1186 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 NUB1Q9Y5A7 615 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 TSC2P49815 1807 aa17.97■□□□□ 0.47
CDK5RAP3-230ENST00000584042 F8VZ95 297 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 CLSTN1O94985 981 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 P4HA1P13674 534 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 SYN1P17600 705 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 PAX3P23760 479 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 KRT9P35527 623 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 MFAP3P55082 362 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 DEFB103AP81534 67 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 LRMPQ12912 555 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 CUL2Q13617 745 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 RAPGEF1Q13905 1077 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 SV2CQ496J9 727 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 SCARA3Q6AZY7 606 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 GJB7Q6PEY0 223 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 C16orf59Q7L2K0 433 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 TMEM130Q8N3G9 435 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 DPF3Q92784 378 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 TOP1MTQ969P6 601 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 DDX27Q96GQ7 796 aaKnown RBP17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 HPDLQ96IR7 371 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 KREMEN1Q96MU8 473 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 LBHD1Q9BQE6 289 aaPredicted RBP17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 STK33Q9BYT3 514 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 RC3H2Q9HBD1 1191 aaKnown RBP17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 UBE2TQ9NPD8 197 aaPredicted RBP17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 NLRC4Q9NPP4 1024 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 ABHD10Q9NUJ1 306 aa17.96■□□□□ 0.47
CDK5RAP3-230ENST00000584042 LRRC53A6NM62 1247 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 PODXLO00592 558 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 PPEF2O14830 753 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 FGBP02675 491 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 ASPAP45381 313 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TAF6P49848 677 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 UPP1Q16831 310 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TMEM240Q5SV17 173 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 CPLX3Q8WVH0 158 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SHC3Q92529 594 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 SYN2Q92777 582 aaPredicted RBP17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 TATDN2Q93075 761 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 PANX2Q96RD6 677 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 BCO2Q9BYV7 579 aa17.95■□□□□ 0.46
CDK5RAP3-230ENST00000584042 NR2E3Q9Y5X4 410 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms