RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 MTMR12Q9C0I1 747 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 MTIF3Q9H2K0 278 aaKnown RBP9.91□□□□□ -0.82
CASC3-209ENST00000583902 FAM207AQ9NSI2 230 aaPredicted RBP9.91□□□□□ -0.82
CASC3-209ENST00000583902 LRFN2Q9ULH4 789 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 TET1Q8NFU7 2136 aa9.91□□□□□ -0.82
CASC3-209ENST00000583902 SSU72P8A0A1W2PR75 194 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 ANO9A1A5B4 782 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 PIRO00625 290 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 ENPP3O14638 875 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 ARHGAP6O43182 974 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 NOL4O94818 638 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 SLC9A1P19634 815 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 DEKP35659 375 aaKnown RBP9.9□□□□□ -0.82
CASC3-209ENST00000583902 JAM2P57087 298 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 POLR2FP61218 127 aaKnown RBP9.9□□□□□ -0.82
CASC3-209ENST00000583902 NOP14P78316 857 aaKnown RBP9.9□□□□□ -0.82
CASC3-209ENST00000583902 TUSC3Q13454 348 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 MEA1Q16626 185 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 SV2CQ496J9 727 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 ZNF667Q5HYK9 610 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 DPY19L2P1Q6NXN4 242 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 PSRC1Q6PGN9 363 aaPredicted RBP9.9□□□□□ -0.82
CASC3-209ENST00000583902 CYP26C1Q6V0L0 522 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 AGMOQ6ZNB7 445 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 EFCAB13Q8IY85 973 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 ABI1Q8IZP0 508 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 C1orf127Q8N9H9 656 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 TAS1R2Q8TE23 839 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 PPP1R10Q96QC0 940 aaKnown RBP9.9□□□□□ -0.82
CASC3-209ENST00000583902 POP1Q99575 1024 aaKnown RBP9.9□□□□□ -0.82
CASC3-209ENST00000583902 CRACR2AQ9BSW2 395 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 NIF3L1Q9GZT8 377 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 WNT8AQ9H1J5 351 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 GANQ9H2C0 597 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 SIX2Q9NPC8 291 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 IL23AQ9NPF7 189 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 LUC7LQ9NQ29 371 aaKnown RBP9.9□□□□□ -0.82
CASC3-209ENST00000583902 ABHD10Q9NUJ1 306 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 GDAP2Q9NXN4 497 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 KIAA1257Q9ULG3 409 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 LTBP2Q14767 1821 aa9.9□□□□□ -0.82
CASC3-209ENST00000583902 ATP8B3O60423 1300 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 ARL5CA6NH57 179 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 TMEM189-UBE2V1I3L0A0 370 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 OFD1O75665 1012 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 KIF4AO95239 1232 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 IPO7O95373 1038 aaKnown RBP9.89□□□□□ -0.83
CASC3-209ENST00000583902 AMHP03971 560 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 SERPING1P05155 500 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 NFICP08651 508 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 EN2P19622 333 aaPredicted RBP9.89□□□□□ -0.83
CASC3-209ENST00000583902 CYP2C18P33260 490 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 SOX5P35711 763 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 PRKCIP41743 596 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 TAF6P49848 677 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 GPNMBQ14956 572 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 ZNF699Q32M78 642 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 NOMO2Q5JPE7 1267 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 C10orf76Q5T2E6 689 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 PDXDC1Q6P996 788 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 ZNF677Q86XU0 584 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 TMEM192Q8IY95 271 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 TC2NQ8N9U0 490 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 OR5B17Q8NGF7 314 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 HELQQ8TDG4 1101 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 SHC3Q92529 594 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 BAP1Q92560 729 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 HPDLQ96IR7 371 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 GAD1Q99259 594 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 BAG1Q99933 345 aaPredicted RBP9.89□□□□□ -0.83
CASC3-209ENST00000583902 TMEM175Q9BSA9 504 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 UBE2TQ9NPD8 197 aaPredicted RBP9.89□□□□□ -0.83
CASC3-209ENST00000583902 DNAJC12Q9UKB3 198 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 DSEQ9UL01 958 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 CNTN6Q9UQ52 1028 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 NR2E3Q9Y5X4 410 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 HTTP42858 3142 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 SCN5AQ14524 2016 aa9.89□□□□□ -0.83
CASC3-209ENST00000583902 F8VZ95 297 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 TRAPPC3O43617 180 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 MGEA5O60502 916 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 TACC1O75410 805 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 VNN1O95497 513 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 KRT19P08727 400 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 AKAP5P24588 427 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 CYLC1P35663 651 aaPredicted RBP9.88□□□□□ -0.83
CASC3-209ENST00000583902 FXR1P51114 621 aaKnown RBP eCLIP9.88□□□□□ -0.83
CASC3-209ENST00000583902 TNNC1P63316 161 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 FPGSQ05932 587 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 ELAVL2Q12926 359 aaKnown RBP9.88□□□□□ -0.83
CASC3-209ENST00000583902 CUL2Q13617 745 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 STILQ15468 1287 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 SEZ6Q53EL9 994 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 C9orf57Q5W0N0 161 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 PHLDB3Q6NSJ2 640 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 DCLRE1AQ6PJP8 1040 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 RRAGAQ7L523 313 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 RTN4RL1Q86UN2 441 aaPredicted RBP9.88□□□□□ -0.83
CASC3-209ENST00000583902 UNC93AQ86WB7 457 aa9.88□□□□□ -0.83
CASC3-209ENST00000583902 FAM71AQ8IYT1 594 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms