RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 SLC2A4RGQ9NR83 387 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 KLHL11Q9NVR0 708 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 PNPOQ9NVS9 261 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 SIDT1Q9NXL6 827 aaKnown RBP5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 GOLGA6AQ9NYA3 693 aa5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 FEZ2Q9UHY8 353 aaPredicted RBP5.83□□□□□ -1.48
SMCHD1-204ENST00000581226 H3BML4 177 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 NCR1O76036 304 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 UBXN7O94888 489 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 AGFG2O95081 481 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 PRDX5P30044 214 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 ARHGAP29Q52LW3 1261 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 CCDC93Q567U6 631 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 ZNF365Q70YC5 407 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 C14orf80Q86SX3 495 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 ZBTB34Q8NCN2 500 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 KLHDC4Q8TBB5 520 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 NUP133Q8WUM0 1156 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 MARS2Q96GW9 593 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 ZSWIM1Q9BR11 485 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 C1orf43Q9BWL3 253 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 RNPEPQ9H4A4 650 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 BRD9Q9H8M2 597 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 SLAMF7Q9NQ25 335 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 SLC45A2Q9UMX9 530 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 REXO2Q9Y3B8 237 aaKnown RBP5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 PCDHA1Q9Y5I3 950 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 FPGT-TNNI3KV9GXZ4 949 aa5.82□□□□□ -1.48
SMCHD1-204ENST00000581226 AATKQ6ZMQ8 1374 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 A0A1B0GTW7 788 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 GAGE12BA1L429 117 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 GAGE12HA6NDE8 117 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 NDUFA10O95299 355 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 TNFRSF1AP19438 455 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 NR4A1P22736 598 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 HTR1BP28222 390 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 IL12RB1P42701 662 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 PIK3CGP48736 1102 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 NKX6-1P78426 367 aaPredicted RBP5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 PLS1Q14651 629 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 GFOD2Q3B7J2 385 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 DAAM2Q86T65 1068 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 FAM90A1Q86YD7 464 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 MAPKAPK5Q8IW41 473 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 SYNE4Q8N205 404 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 TTC8Q8TAM2 541 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 TNPO1Q92973 898 aaKnown RBP5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 RUNDC1Q96C34 613 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 SLC35A4Q96G79 324 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 NRDE2Q9H7Z3 1164 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 ARMT1Q9H993 441 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 CHPF2Q9P2E5 772 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 GABBR1Q9UBS5 961 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 MAP3K2Q9Y2U5 619 aa5.81□□□□□ -1.48
SMCHD1-204ENST00000581226 NPIPB8E9PQR5 432 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 ERC2O15083 957 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 GPANK1O95872 356 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 HLA-DOAP06340 250 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 GJB1P08034 283 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 LAG3P18627 525 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 ATF3P18847 181 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 PTGS2P35354 604 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 PHKA1P46020 1223 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 PSMC1P62191 440 aaKnown RBP5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 HSD11B2P80365 405 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 TIGD2Q4W5G0 525 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 FNDC7Q5VTL7 733 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 FOXR2Q6PJQ5 311 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 PPP1R3BQ86XI6 285 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 SLC17A8Q8NDX2 589 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 HAS1Q92839 578 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 MTFMTQ96DP5 389 aaKnown RBP5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 PNKPQ96T60 521 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 IMPG2Q9BZV3 1241 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 MRPL46Q9H2W6 279 aaKnown RBP5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 C1orf112Q9NSG2 853 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 CFAP97Q9P2B7 532 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 USP25Q9UHP3 1055 aa5.8□□□□□ -1.48
SMCHD1-204ENST00000581226 VSTM5A8MXK1 200 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 B3GALT2O43825 422 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 PPFIA4O75335 1185 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 ANXA1P04083 346 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 CFIP05156 583 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 HMGB1P09429 215 aaKnown RBP5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 FCER1AP12319 257 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 FGFR4P22455 802 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 MXRA7P84157 204 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 OCA2Q04671 838 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 SLFN5Q08AF3 891 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 BEAN1Q3B7T3 259 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 SPDYE7PQ495Y7 208 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 CRIP3Q6Q6R5 217 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 OVCH2Q7RTZ1 564 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 TMEM132CQ8N3T6 1108 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 TMIEQ8NEW7 156 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 PLBD2Q8NHP8 589 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 ZNF483Q8TF39 744 aaPredicted RBP5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 KLHL32Q96NJ5 620 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 LRFN3Q9BTN0 628 aa5.79□□□□□ -1.48
SMCHD1-204ENST00000581226 TLR10Q9BXR5 811 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms