RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 PRSS53Q2L4Q9 553 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 CCDC38Q502W7 563 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 WDR45BQ5MNZ6 344 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 PGBD2Q6P3X8 592 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 PDXDC1Q6P996 788 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 C4orf50Q6ZRC1 276 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 C1orf122Q6ZSJ8 110 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 GSPT2Q8IYD1 628 aaKnown RBP3.66□□□□□ -1.82
KPNB1-208ENST00000580019 COLGALT2Q8IYK4 626 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 KRT78Q8N1N4 520 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 MYCT1Q8N699 235 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 BOLLQ8N9W6 283 aaKnown RBP3.66□□□□□ -1.82
KPNB1-208ENST00000580019 CLEC4DQ8WXI8 215 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 JADE3Q92613 823 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 ARL8AQ96BM9 186 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 LTV1Q96GA3 475 aaPredicted RBP3.66□□□□□ -1.82
KPNB1-208ENST00000580019 CHAMP1Q96JM3 812 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 RIPOR3Q96MK2 946 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 SERINC2Q96SA4 455 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 PHF20Q9BVI0 1012 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 OR10A2Q9H208 303 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 AGO3Q9H9G7 860 aaKnown RBP3.66□□□□□ -1.82
KPNB1-208ENST00000580019 GPR27Q9NS67 375 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 TOMM22Q9NS69 142 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 RRN3Q9NYV6 651 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 PDP2Q9P2J9 529 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 KCNG1Q9UIX4 513 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 GPR52Q9Y2T5 361 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 PCDHGB6Q9Y5F9 930 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 COL11A2P13942 1736 aaPredicted RBP3.66□□□□□ -1.82
KPNB1-208ENST00000580019 XDHP47989 1333 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 SALL3Q9BXA9 1300 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 TOP2BQ02880 1626 aa3.66□□□□□ -1.82
KPNB1-208ENST00000580019 A0A1W2PRQ8 180 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 MEFVO15553 781 aaPredicted RBP3.65□□□□□ -1.83
KPNB1-208ENST00000580019 H2AFYO75367 372 aaKnown RBP3.65□□□□□ -1.83
KPNB1-208ENST00000580019 MBD4O95243 580 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 PYGLP06737 847 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 IFIT1P09914 478 aaKnown RBP3.65□□□□□ -1.83
KPNB1-208ENST00000580019 MYBP10242 640 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 PEX2P28328 305 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 PPM1AP35813 382 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 ABCG1P45844 678 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 DNM2P50570 870 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 G3BP1Q13283 466 aaKnown RBP eCLIP3.65□□□□□ -1.837e-7■■□□□ 12.9
KPNB1-208ENST00000580019 BLMHQ13867 455 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 ERCC6LQ2NKX8 1250 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 WDR72Q3MJ13 1102 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 TUBB8Q3ZCM7 444 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 CCDC184Q52MB2 194 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 TSHZ3Q63HK5 1081 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 RETSATQ6NUM9 610 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 CYP26C1Q6V0L0 522 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 LBX2Q6XYB7 198 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 LARP4Q71RC2 724 aaKnown RBP eCLIP3.65□□□□□ -1.83
KPNB1-208ENST00000580019 PDZD4Q76G19 769 aaPredicted RBP3.65□□□□□ -1.83
KPNB1-208ENST00000580019 C16orf59Q7L2K0 433 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 OVCH1Q7RTY7 1134 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 OVCH2Q7RTZ1 564 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 CREBRFQ8IUR6 639 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 DENND1CQ8IV53 801 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 PPIL6Q8IXY8 311 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 KIAA0319LQ8IZA0 1049 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 OR8H2Q8N162 312 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 ZNF610Q8N9Z0 462 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 KREMEN2Q8NCW0 462 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 PCDH19Q8TAB3 1148 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 NUP133Q8WUM0 1156 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 HDAC2Q92769 488 aaKnown RBP3.65□□□□□ -1.83
KPNB1-208ENST00000580019 FBXW5Q969U6 566 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 TBC1D20Q96BZ9 403 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 MVB12AQ96EY5 273 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 ACAP3Q96P50 834 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 SEC62Q99442 399 aaKnown RBP3.65□□□□□ -1.83
KPNB1-208ENST00000580019 GPR87Q9BY21 358 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 GTPBP4Q9BZE4 634 aaKnown RBP3.65□□□□□ -1.83
KPNB1-208ENST00000580019 CERS4Q9HA82 394 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 TOPORSQ9NS56 1045 aaPredicted RBP3.65□□□□□ -1.83
KPNB1-208ENST00000580019 SMC4Q9NTJ3 1288 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 CLDND1Q9NY35 253 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 TRPS1Q9UHF7 1281 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 GJD2Q9UKL4 321 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 PADI4Q9UM07 663 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 L1RE1Q9UN81 338 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 POLHQ9Y253 713 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 SPO11Q9Y5K1 396 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 NPFFR2Q9Y5X5 522 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 TOPBP1Q92547 1522 aa3.65□□□□□ -1.83
KPNB1-208ENST00000580019 MROH2BQ7Z745 1585 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 FAM170AA1A519 330 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 CCDC66A2RUB6 948 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 RHPN2P1A8MT19 583 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 M0R3H8 397 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 FOXN3O00409 490 aaPredicted RBP3.64□□□□□ -1.83
KPNB1-208ENST00000580019 WNT9AO14904 365 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 SLC27A2O14975 620 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 NCAM2O15394 837 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 TGM5O43548 720 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 DTNBO60941 627 aa3.64□□□□□ -1.83
KPNB1-208ENST00000580019 UBXN7O94888 489 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms