RNA–Protein interactions for RNA: ENST00000576484.1

CDC27-219, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-219ENST00000576484 PRDM11Q9NQV5 511 aa6.34□□□□□ -1.39
CDC27-219ENST00000576484 SIDT1Q9NXL6 827 aaKnown RBP6.34□□□□□ -1.39
CDC27-219ENST00000576484 JKAMPQ9P055 326 aa6.34□□□□□ -1.39
CDC27-219ENST00000576484 STAP2Q9UGK3 403 aa6.34□□□□□ -1.39
CDC27-219ENST00000576484 USP15Q9Y4E8 981 aaPredicted RBP6.34□□□□□ -1.39
CDC27-219ENST00000576484 A0A088AWK7 358 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 FAM227AF5H4B4 570 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 SCAF4O95104 1147 aaKnown RBP6.33□□□□□ -1.4
CDC27-219ENST00000576484 MATN4O95460 622 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 AHSGP02765 367 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 C1SP09871 688 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 TNFRSF1AP19438 455 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 GCSHP23434 173 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 PIK3CGP48736 1102 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 AGFG1P52594 562 aaKnown RBP6.33□□□□□ -1.4
CDC27-219ENST00000576484 NOMO3P69849 1222 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 SLC25A3Q00325 362 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 SLFN5Q08AF3 891 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 ANO6Q4KMQ2 910 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 PDCD4Q53EL6 469 aaKnown RBP6.33□□□□□ -1.4
CDC27-219ENST00000576484 NOMO2Q5JPE7 1267 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 UTP14CQ5TAP6 766 aaKnown RBP6.33□□□□□ -1.4
CDC27-219ENST00000576484 SWSAP1Q6NVH7 229 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 GDF7Q7Z4P5 450 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 DAAM2Q86T65 1068 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 DGKHQ86XP1 1220 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 RHOT2Q8IXI1 618 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 CPT1CQ8TCG5 803 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 VPS11Q9H270 941 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 SLAMF7Q9NQ25 335 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 TRPM5Q9NZQ8 1165 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 PCDHA1Q9Y5I3 950 aa6.33□□□□□ -1.4
CDC27-219ENST00000576484 FRMPD2Q68DX3 1309 aaPredicted RBP6.32□□□□□ -1.4
CDC27-219ENST00000576484 CCDC78A2IDD5 438 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 PRSS29PA6NIE9 313 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 AGFG2O95081 481 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 FCER1AP12319 257 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 PHKA1P46020 1223 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 USP14P54578 494 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 FAM189BP81408 668 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 LLGL1Q15334 1064 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 KIAA0319LQ8IZA0 1049 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 TMIEQ8NEW7 156 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 OR56A1Q8NGH5 318 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 TNPO1Q92973 898 aaKnown RBP6.32□□□□□ -1.4
CDC27-219ENST00000576484 MTFMTQ96DP5 389 aaKnown RBP6.32□□□□□ -1.4
CDC27-219ENST00000576484 KLHL32Q96NJ5 620 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 DCLRE1CQ96SD1 692 aaKnown RBP6.32□□□□□ -1.4
CDC27-219ENST00000576484 TLR10Q9BXR5 811 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 ZNF703Q9H7S9 590 aaPredicted RBP6.32□□□□□ -1.4
CDC27-219ENST00000576484 KLHL11Q9NVR0 708 aa6.32□□□□□ -1.4
CDC27-219ENST00000576484 DIRC3C9JPN6 131 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 RPS6KA4O75676 772 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 RECQL4O94761 1208 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 FSHBP01225 129 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 GNAI3P08754 354 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 GNAI1P63096 354 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 ZXDAP98168 799 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 TSHZ3Q63HK5 1081 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 CYB5RLQ6IPT4 315 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 CHST15Q7LFX5 561 aaPredicted RBP6.31□□□□□ -1.4
CDC27-219ENST00000576484 BRIX1Q8TDN6 353 aaKnown RBP6.31□□□□□ -1.4
CDC27-219ENST00000576484 CACTINQ8WUQ7 758 aaKnown RBP6.31□□□□□ -1.4
CDC27-219ENST00000576484 ZSWIM1Q9BR11 485 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 FAM204AQ9H8W3 233 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 GNL3LQ9NVN8 582 aaKnown RBP6.31□□□□□ -1.4
CDC27-219ENST00000576484 PARPBPQ9NWS1 579 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 AATKQ6ZMQ8 1374 aa6.31□□□□□ -1.4
CDC27-219ENST00000576484 CAPN8A6NHC0 703 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 TPP1O14773 563 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 KIF3BO15066 747 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 GJB1P08034 283 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 CKBP12277 381 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 C6P13671 934 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 NR4A1P22736 598 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 ZFP36P26651 326 aaKnown RBP6.3□□□□□ -1.4
CDC27-219ENST00000576484 PSMC1P62191 440 aaKnown RBP6.3□□□□□ -1.4
CDC27-219ENST00000576484 DGCR2P98153 550 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 EXOSC9Q06265 439 aaKnown RBP6.3□□□□□ -1.4
CDC27-219ENST00000576484 FGL2Q14314 439 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 LRRC55Q6ZSA7 311 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 FAM156AQ8NDB6 213 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 NUP133Q8WUM0 1156 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 MARS2Q96GW9 593 aaKnown RBP6.3□□□□□ -1.4
CDC27-219ENST00000576484 PLEKHG4BQ96PX9 1271 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 ZNF747Q9BV97 191 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 REXO4Q9GZR2 422 aaKnown RBP6.3□□□□□ -1.4
CDC27-219ENST00000576484 BRD9Q9H8M2 597 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 ZMAT3Q9HA38 289 aaKnown RBP6.3□□□□□ -1.4
CDC27-219ENST00000576484 ATP6V0A4Q9HBG4 840 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 RLIMQ9NVW2 624 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 USP25Q9UHP3 1055 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 CPA4Q9UI42 421 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 ZDHHC8Q9ULC8 765 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 PCDHA6Q9UN73 950 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 ATP11BQ9Y2G3 1177 aa6.3□□□□□ -1.4
CDC27-219ENST00000576484 ZNF785A8K8V0 405 aa6.29□□□□□ -1.4
CDC27-219ENST00000576484 E9PLN8 166 aa6.29□□□□□ -1.4
CDC27-219ENST00000576484 NCR1O76036 304 aa6.29□□□□□ -1.4
CDC27-219ENST00000576484 ZBED1O96006 694 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms