RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 RABGGTAQ92696 567 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 PAAF1Q9BRP4 392 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 CWH43Q9H720 699 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 ITGA11Q9UKX5 1188 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 AGAP1Q9UPQ3 857 aa9.21□□□□□ -0.94
PRPF8-213ENST00000576407 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.21□□□□□ -0.94
PRPF8-213ENST00000576407 MRPL42Q9Y6G3 142 aaKnown RBP9.21□□□□□ -0.94
PRPF8-213ENST00000576407 LAMA2P24043 3122 aaKnown RBP9.2□□□□□ -0.94
PRPF8-213ENST00000576407 A0A1B0GTH6 734 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.2□□□□□ -0.94
PRPF8-213ENST00000576407 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.2□□□□□ -0.94
PRPF8-213ENST00000576407 ANO9A1A5B4 782 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 LGALS16A8MUM7 142 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 PODXLO00592 558 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 PIRO00625 290 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 PPEF2O14830 753 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 PMM2O15305 246 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 P4HA2O15460 535 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 N4BP1O75113 896 aaKnown RBP9.2□□□□□ -0.94
PRPF8-213ENST00000576407 HLA-DRAP01903 254 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 KRT19P08727 400 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 POLR2BP30876 1174 aaKnown RBP9.2□□□□□ -0.94
PRPF8-213ENST00000576407 RPL9P32969 192 aaKnown RBP9.2□□□□□ -0.94
PRPF8-213ENST00000576407 PBX3P40426 434 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 PIK3CAP42336 1068 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 OR1G1P47890 313 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 SLC11A1P49279 550 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 BCAR1P56945 870 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 RBP5P82980 135 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 TRPC3Q13507 836 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 NCOA4Q13772 614 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 SPOUT1Q5T280 376 aaKnown RBP9.2□□□□□ -0.94
PRPF8-213ENST00000576407 FIBCD1Q8N539 461 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 C3orf58Q8NDZ4 430 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 FBXL13Q8NEE6 735 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 TAS1R2Q8TE23 839 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 SEMA4DQ92854 862 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 DDX27Q96GQ7 796 aaKnown RBP9.2□□□□□ -0.94
PRPF8-213ENST00000576407 UROC1Q96N76 676 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 TMEM175Q9BSA9 504 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 IFNKQ9P0W0 207 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 COQ4Q9Y3A0 265 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 PCDHA11Q9Y5I1 949 aa9.2□□□□□ -0.94
PRPF8-213ENST00000576407 GBF1Q92538 1859 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 GTPBP10A4D1E9 387 aaKnown RBP9.19□□□□□ -0.94
PRPF8-213ENST00000576407 LINC01553A4QN01 128 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 F8W810 466 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 NRP1O14786 923 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 TEX33O43247 280 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 AP5Z1O43299 807 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 LRRN2O75325 713 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 B3GAT3O94766 335 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 KIF4AO95239 1232 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 ALDH2P05091 517 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 GALTP07902 379 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 LINC00271P0C7V0 271 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 LAG3P18627 525 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 IGFBP6P24592 240 aaPredicted RBP9.19□□□□□ -0.94
PRPF8-213ENST00000576407 PBX2P40425 430 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 ALDH7A1P49419 539 aaKnown RBP9.19□□□□□ -0.94
PRPF8-213ENST00000576407 UBASH3AP57075 661 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 MYL6P60660 151 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 PLCB2Q00722 1185 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 UBXN1Q04323 297 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 CETN1Q12798 172 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 SGSM1Q2NKQ1 1148 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 UVSSAQ2YD98 709 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 FILIP1LQ4L180 1135 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 EPC2Q52LR7 807 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 FKBP15Q5T1M5 1219 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 DCLRE1AQ6PJP8 1040 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 SARM1Q6SZW1 724 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 KCNT2Q6UVM3 1135 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 HASPINQ8TF76 798 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 CLP1Q92989 425 aaKnown RBP9.19□□□□□ -0.94
PRPF8-213ENST00000576407 ELMO3Q96BJ8 720 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 CRACR2AQ9BSW2 395 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 PI4K2AQ9BTU6 479 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 PBX4Q9BYU1 374 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 TSPYL1Q9H0U9 437 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 XYLT2Q9H1B5 865 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 RAB20Q9NX57 234 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 FAN1Q9Y2M0 1017 aa9.19□□□□□ -0.94
PRPF8-213ENST00000576407 YBX2Q9Y2T7 364 aaKnown RBP9.19□□□□□ -0.94
PRPF8-213ENST00000576407 PRG3Q9Y2Y8 225 aaPredicted RBP9.19□□□□□ -0.94
PRPF8-213ENST00000576407 R3HCC1Q9Y3T6 440 aaKnown RBP9.19□□□□□ -0.94
PRPF8-213ENST00000576407 NT5C1B-RDH14C9J2C7 533 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 TMEM189-UBE2V1I3L0A0 370 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 SPTLC1O15269 473 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 ARHGEF15O94989 841 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 STAU1O95793 577 aaKnown RBP9.18□□□□□ -0.94
PRPF8-213ENST00000576407 ASS1P00966 412 aaKnown RBP9.18□□□□□ -0.94
PRPF8-213ENST00000576407 ITGB1P05556 798 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 CA3P07451 260 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 SLC9A1P19634 815 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 ATICP31939 592 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 GTF2F1P35269 517 aaKnown RBP eCLIP9.18□□□□□ -0.94
PRPF8-213ENST00000576407 PNPLA4P41247 253 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 TAF6P49848 677 aa9.18□□□□□ -0.94
PRPF8-213ENST00000576407 LILRA4P59901 499 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms