RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 TMEM209Q96SK2 561 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 BPIFA3Q9BQP9 254 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 APOL5Q9BWW9 433 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 NSUN3Q9H649 340 aaKnown RBP8.56□□□□□ -1.04
CCDC40-215ENST00000576033 CBX8Q9HC52 389 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 AAASQ9NRG9 546 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 ANO10Q9NW15 660 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 RNF216Q9NWF9 866 aaPredicted RBP8.56□□□□□ -1.04
CCDC40-215ENST00000576033 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 KCNG1Q9UIX4 513 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 BARX2Q9UMQ3 279 aaPredicted RBP8.56□□□□□ -1.04
CCDC40-215ENST00000576033 RWDD3Q9Y3V2 267 aa8.56□□□□□ -1.04
CCDC40-215ENST00000576033 ZNF233A6NK53 670 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 H3BQ06 376 aaPredicted RBP8.55□□□□□ -1.04
CCDC40-215ENST00000576033 PDXKO00764 312 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 TADA2AO75478 443 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 SOD2P04179 222 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 ALDH2P05091 517 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 CNPP09543 421 aaKnown RBP8.55□□□□□ -1.04
CCDC40-215ENST00000576033 OR4Q2P0C623 313 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 SPATA31D3P0C874 917 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 CTSAP10619 480 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 SCP2P22307 547 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 PSMD6Q15008 389 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 ANO6Q4KMQ2 910 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 HSP90AA4PQ58FG1 418 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 FAM171A1Q5VUB5 890 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 TDRD10Q5VZ19 366 aaKnown RBP8.55□□□□□ -1.04
CCDC40-215ENST00000576033 TTI2Q6NXR4 508 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 EP400NLQ6ZTU2 488 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 SPATA31D4Q6ZUB0 917 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 TMC7Q7Z402 723 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 DDX53Q86TM3 631 aaKnown RBP8.55□□□□□ -1.04
CCDC40-215ENST00000576033 MICAL1Q8TDZ2 1067 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 RIN2Q8WYP3 895 aaPredicted RBP8.55□□□□□ -1.04
CCDC40-215ENST00000576033 RSPH1Q8WYR4 309 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 CCDC47Q96A33 483 aaKnown RBP8.55□□□□□ -1.04
CCDC40-215ENST00000576033 CGRRF1Q99675 332 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 RMND1Q9NWS8 449 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 DPP3Q9NY33 737 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 UBQLN1Q9UMX0 589 aaKnown RBP8.55□□□□□ -1.04
CCDC40-215ENST00000576033 TRAF3IP3Q9Y228 551 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 NME7Q9Y5B8 376 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 DENND4AQ7Z401 1863 aa8.55□□□□□ -1.04
CCDC40-215ENST00000576033 TCF20Q9UGU0 1960 aaKnown RBP8.55□□□□□ -1.04
CCDC40-215ENST00000576033 ANO9A1A5B4 782 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 PIRO00625 290 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 TEX28O15482 410 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 AP5Z1O43299 807 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 CALUO43852 315 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-215ENST00000576033 LILRB3O75022 631 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 CLASP2O75122 1294 aaKnown RBP8.54□□□□□ -1.04
CCDC40-215ENST00000576033 IL18RAPO95256 599 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 VNN1O95497 513 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 CXCL14O95715 111 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 CST3P01034 146 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-215ENST00000576033 KRT19P08727 400 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 WEE2P0C1S8 567 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 POU3F3P20264 500 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-215ENST00000576033 LRPAP1P30533 357 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 ABCD1P33897 745 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 LTBRP36941 435 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 RAP1GAPP47736 663 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 GLUD2P49448 558 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 ZNF165P49910 485 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 KCNQ1P51787 676 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 NLRP12P59046 1061 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 PPP3CAQ08209 521 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 BFSP1Q12934 665 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 SMC1AQ14683 1233 aaKnown RBP8.54□□□□□ -1.04
CCDC40-215ENST00000576033 DUSP6Q16828 381 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 HS1BP3Q53T59 392 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 KIAA0319Q5VV43 1072 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 CENPPQ6IPU0 288 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 SPOPLQ6IQ16 392 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 SCARA5Q6ZMJ2 495 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 OSTM1Q86WC4 334 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 ZC3H3Q8IXZ2 948 aaKnown RBP8.54□□□□□ -1.04
CCDC40-215ENST00000576033 FAM186BQ8IYM0 893 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 C12orf76Q8N812 135 aaPredicted RBP8.54□□□□□ -1.04
CCDC40-215ENST00000576033 BEST2Q8NFU1 509 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 MFSD14AQ96MC6 490 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 KLHL5Q96PQ7 755 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 LPIN3Q9BQK8 851 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 COLEC11Q9BWP8 271 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 DNAJC25Q9H1X3 360 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 PLEKHA5Q9HAU0 1116 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 CHST7Q9NS84 486 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 INTS13Q9NVM9 706 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 CLDND1Q9NY35 253 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 POLIQ9UNA4 740 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 AGAP1Q9UPQ3 857 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 LZTS1Q9Y250 596 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 C2CD2Q9Y426 696 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 DOCK6Q96HP0 2047 aa8.54□□□□□ -1.04
CCDC40-215ENST00000576033 SF3B1O75533 1304 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCDC40-215ENST00000576033 TMEM189-UBE2V1I3L0A0 370 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 SLC34A2O95436 690 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 VNN2O95498 520 aa8.53□□□□□ -1.04
CCDC40-215ENST00000576033 LDHAP00338 332 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms