RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 EFCAB13Q8IY85 973 aa25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 MAGOHBQ96A72 148 aaKnown RBP25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 HOXC6P09630 235 aa25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 TFAMQ00059 246 aaKnown RBP25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 SIX1Q15475 284 aaPredicted RBP25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 ZNF568Q3ZCX4 644 aa25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 ATF7IP2Q5U623 682 aa25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 DUPD1Q68J44 220 aa25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 CNTN6Q9UQ52 1028 aa25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 PPME1Q9Y570 386 aa25.25■■□□□ 1.63
NPLOC4-217ENST00000574897 GAS2O43903 313 aaKnown RBP25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 RARAP10276 462 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 TBXAS1P24557 533 aaPredicted RBP25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 ADORA2AP29274 412 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 RWDD2BP57060 319 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 PPFIA1Q13136 1202 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 TAPT1Q6NXT6 567 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 SCARA5Q6ZMJ2 495 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 MMS22LQ6ZRQ5 1243 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 ERP44Q9BS26 406 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 PTPRHQ9HD43 1115 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 AVENQ9NQS1 362 aaPredicted RBP25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 SNX24Q9Y343 169 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 HBP1O60381 514 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 PROZP22891 400 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 KCNJ1P48048 391 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 HNRNPH2P55795 449 aaKnown RBP25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 TMEM132AQ24JP5 1023 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 MAP1SQ66K74 1059 aaPredicted RBP25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 MPZL3Q6UWV2 235 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 UBR7Q8N806 425 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP25.24■■□□□ 1.637e-8■■■■■ 102.7
NPLOC4-217ENST00000574897 HERPUD2Q9BSE4 406 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 FZD8Q9H461 694 aa25.24■■□□□ 1.63
NPLOC4-217ENST00000574897 C22orf31O95567 290 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 INSRRP14616 1297 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 MBTD1Q05BQ5 628 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 MAMDC4Q6UXC1 1216 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 IMPG2Q9BZV3 1241 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 FAM114A2Q9NRY5 505 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 ADAM22Q9P0K1 906 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 KAT6AQ92794 2004 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 ASB14A6NK59 587 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 PDHXO00330 501 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 ACKR2O00590 384 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 ZNF286BP0CG31 522 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 CCDC137Q6PK04 289 aaKnown RBP25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 TSHZ1Q6ZSZ6 1077 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 SHCBP1Q8NEM2 672 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 GPRC5AQ8NFJ5 357 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 ZNF606Q8WXB4 792 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 RAB17Q9H0T7 212 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 C2orf40Q9H1Z8 148 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 ZSWIM8A7E2V4 1837 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 SCN4AP35499 1836 aa25.23■■□□□ 1.63
NPLOC4-217ENST00000574897 LGALS2P05162 132 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 WEE2P0C1S8 567 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 ACTN2P35609 894 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 TMC3Q7Z5M5 1100 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 UBLCP1Q8WVY7 318 aaPredicted RBP25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 ERAP1Q9NZ08 941 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 CLEC11AQ9Y240 323 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 GLTPD2A6NH11 291 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 CXCL8P10145 99 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 BRD2P25440 801 aaKnown RBP25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 ADCYAP1R1P41586 468 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 ZNF132P52740 706 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 PTP4A2Q12974 167 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 DHX34Q14147 1143 aaKnown RBP25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 DUOXA2Q1HG44 320 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 ZNF792Q3KQV3 632 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 CEP85LQ5SZL2 805 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 TTC19Q6DKK2 380 aaPredicted RBP25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 CDT1Q9H211 546 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 PTPN22Q9Y2R2 807 aa25.22■■□□□ 1.63
NPLOC4-217ENST00000574897 C11orf97A0A1B0GVM6 126 aaPredicted RBP25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 BTBD19C9JJ37 291 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 H0YGN5 161 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 MYO1FO00160 1098 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 CHRNA3P32297 505 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 SLC26A2P50443 739 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 DHX9Q08211 1270 aaKnown RBP25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 ZSCAN26Q16670 478 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 IFT122Q9HBG6 1241 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 LRRC4CQ9HCJ2 640 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 CISHQ9NSE2 258 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 ZDHHC18Q9NUE0 388 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 NFS1Q9Y697 457 aa25.21■■□□□ 1.63
NPLOC4-217ENST00000574897 MYBL1P10243 752 aa25.2■■□□□ 1.63
NPLOC4-217ENST00000574897 MAMLD1Q13495 774 aa25.2■■□□□ 1.63
NPLOC4-217ENST00000574897 CLUL1Q15846 466 aa25.2■■□□□ 1.63
NPLOC4-217ENST00000574897 PPP2R5EQ16537 467 aa25.2■■□□□ 1.63
NPLOC4-217ENST00000574897 AFG1LQ8WV93 481 aa25.2■■□□□ 1.63
NPLOC4-217ENST00000574897 PNMA3Q9UL41 463 aa25.2■■□□□ 1.63
NPLOC4-217ENST00000574897 TRIP11Q15643 1979 aa25.2■■□□□ 1.63
NPLOC4-217ENST00000574897 FAM187AA6NFU0 413 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 ECM2O94769 699 aaPredicted RBP25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 TMEM191BP0C7N4 346 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 HSPA6P17066 643 aa25.2■■□□□ 1.62
NPLOC4-217ENST00000574897 GRM1Q13255 1194 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms