RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 ZNF286BP0CG31 522 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 MYL6P60660 151 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 TRPC3Q13507 836 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 TRIM72Q6ZMU5 477 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 DPP9Q86TI2 863 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 ABRAQ8N0Z2 381 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 CEP120Q8N960 986 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 PPTC7Q8NI37 304 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 AFG1LQ8WV93 481 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 MROH7Q68CQ1 1323 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 MGAMO43451 1857 aa15□□□□□ -0.01
VPS33B-208ENST00000574755 DAPK3O43293 454 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 PYGMP11217 842 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 HSPA6P17066 643 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 CTNNA2P26232 953 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 ECHS1P30084 290 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 PHKA2P46019 1235 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 NOMO3P69849 1222 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 DR1Q01658 176 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 POU5F1Q01860 360 aaKnown RBP14.99□□□□□ -0.01
VPS33B-208ENST00000574755 SGSM1Q2NKQ1 1148 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 EEF1DP3Q658K8 133 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 MAMDC4Q6UXC1 1216 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 MON1BQ7L1V2 547 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 MREGQ8N565 214 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 PPP1R16BQ96T49 567 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 ANK1P16157 1881 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 HOXC6P09630 235 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 IQCF3P0C7M6 154 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 CD58P19256 250 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 LMAN1P49257 510 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 RWDD2BP57060 319 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 CFAP58Q5T655 872 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 LLGL2Q6P1M3 1020 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 ANKRD23Q86SG2 305 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 ZIM3Q96PE6 472 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 C11orf70Q9BRQ4 267 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 TRIM7Q9C029 511 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 RAB17Q9H0T7 212 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 CDT1Q9H211 546 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 IFT122Q9HBG6 1241 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 PRMT7Q9NVM4 692 aaPredicted RBP14.99□□□□□ -0.01
VPS33B-208ENST00000574755 MORF4L1Q9UBU8 362 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 AKT3Q9Y243 479 aa14.99□□□□□ -0.01
VPS33B-208ENST00000574755 ZSWIM8A7E2V4 1837 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 BHMG1C9JSJ3 638 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 MYO1FO00160 1098 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 OPA1O60313 960 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 CSDE1O75534 798 aaKnown RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 TNNC2P02585 160 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 GPR142Q7Z601 462 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 ZNF467Q7Z7K2 595 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 EFCAB13Q8IY85 973 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 ANKRD36BP1Q96IX9 119 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 TRIM51Q9BSJ1 452 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 NFKBIZQ9BYH8 718 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 NIF3L1Q9GZT8 377 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 DPH5Q9H2P9 285 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 ADAM22Q9P0K1 906 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 TNFSF13BQ9Y275 285 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 A0A087WZ62 844 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 RBM47A0AV96 593 aaKnown RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 ERICH4A6NGS2 130 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 MAGEB2O15479 319 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 PHF2O75151 1096 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 CXCL8P10145 99 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 DHX34Q14147 1143 aaKnown RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 ZNF699Q32M78 642 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 ZNF394Q53GI3 561 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 LIN9Q5TKA1 542 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 ZNF606Q8WXB4 792 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 EMID1Q96A84 441 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 FDXACB1Q9BRP7 624 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 PLVAPQ9BX97 442 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 TRIM31Q9BZY9 425 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 KATNBL1Q9H079 304 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 NEUROG2Q9H2A3 272 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 RPF1Q9H9Y2 349 aaKnown RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 GBA2Q9HCG7 927 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-208ENST00000574755 PSD3Q9NYI0 1048 aa14.98□□□□□ -0.01
VPS33B-208ENST00000574755 GOLGA6CA6NDK9 693 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 B4GALT4O60513 344 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 SNAI1O95863 264 aaPredicted RBP14.97□□□□□ -0.01
VPS33B-208ENST00000574755 GOLGA6DP0CG33 693 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 TMOD1P28289 359 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 ZNF132P52740 706 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 SCARA5Q6ZMJ2 495 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 TMEM192Q8IY95 271 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 SEC14L1Q92503 715 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 C18orf8Q96DM3 657 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 SH3GL2Q99962 352 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 FAM114A2Q9NRY5 505 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 CISHQ9NSE2 258 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 GOLGA6AQ9NYA3 693 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 MTUS1Q9ULD2 1270 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 GOLGA8KD6RF30 607 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 H3BRB1 525 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 PPFIA4O75335 1185 aa14.97□□□□□ -0.01
VPS33B-208ENST00000574755 VTNP04004 478 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms