RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 A0A087WWV3 80 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 A0A0B4J269 797 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 KRBA1A5PL33 1030 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 DDTLA6NHG4 134 aaPredicted RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 LRRC72A6NJI9 287 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 A6NLC8 198 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 PSMD14O00487 310 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 PQBP1O60828 265 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 ZNF254O75437 659 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 ERLIN1O75477 346 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 SLC22A3O75751 556 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 BAG3O95817 575 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 ZBED1O96006 694 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 GOLGA8HP0CJ92 632 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 PDCP20941 246 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 PSMA4P25789 261 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 MAPK3P27361 379 aaPredicted RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 NOS3P29474 1203 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 SHMT1P34896 483 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 HSD17B2P37059 387 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 IARSP41252 1262 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 IFNAR2P48551 515 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 TKTL1P51854 596 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 NLRP5P59047 1200 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 KRT85P78386 507 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 JAG1P78504 1218 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 KIF23Q02241 960 aaPredicted RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 ICA1Q05084 483 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 DEUP1Q05D60 604 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 FUT2Q10981 343 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 TROAPQ12815 778 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 PRKG1Q13976 671 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 RRP1BQ14684 758 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 PLA2G4EQ3MJ16 856 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 GNPTABQ3T906 1256 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 CEP55Q53EZ4 464 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 DCAF17Q5H9S7 520 aaPredicted RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 EARS2Q5JPH6 523 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 DGKKQ5KSL6 1271 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 SH2D4BQ5SQS7 431 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 IFIT1BQ5T764 474 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 SPRYD7Q5W111 196 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 KAZNQ674X7 775 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 KRT40Q6A162 431 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 FCRLBQ6BAA4 426 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 MCTP2Q6DN12 878 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 PKN3Q6P5Z2 889 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 FBXL19Q6PCT2 694 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 RFX8Q6ZV50 586 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 FAM47EQ6ZV65 393 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 SH3BP5LQ7L8J4 393 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 ZNF598Q86UK7 904 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 NLRP8Q86W28 1048 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 SLITRK4Q8IW52 837 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 OR8H3Q8N146 312 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 LRRC47Q8N1G4 583 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 SRBD1Q8N5C6 995 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 CAMKK1Q8N5S9 505 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 LINC00469Q8N7U9 141 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 TTLL6Q8N841 843 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 FANCBQ8NB91 859 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 PCSK9Q8NBP7 692 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 SPC24Q8NBT2 197 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 ZMIZ2Q8NF64 920 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 IL17RDQ8NFM7 739 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 NLGN2Q8NFZ4 835 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 GOT1L1Q8NHS2 421 aaPredicted RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 NOC3LQ8WTT2 800 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 BTN2A2Q8WVV5 523 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 RUBCNQ92622 972 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 FATE1Q969F0 183 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 HSPBAP1Q96EW2 488 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 GIMAP5Q96F15 307 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 FUBP3Q96I24 572 aaKnown RBP eCLIP3.82□□□□□ -1.8
SMG6-208ENST00000570874 PRMT6Q96LA8 375 aaPredicted RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 EYA3Q99504 573 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 VPS11Q9H270 941 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 GOLPH3LQ9H4A5 285 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 RNF41Q9H4P4 317 aaPredicted RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 TDRD3Q9H7E2 651 aaKnown RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 IFT22Q9H7X7 185 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 DNAJC18Q9H819 358 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 FAM204AQ9H8W3 233 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 ATP13A1Q9HD20 1204 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 RRAGDQ9NQL2 400 aaPredicted RBP3.82□□□□□ -1.8
SMG6-208ENST00000570874 USP40Q9NVE5 1235 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 PPP1R14DQ9NXH3 145 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 UBP1Q9NZI7 540 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 VPS54Q9P1Q0 977 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 EXTL2Q9UBQ6 330 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 AASSQ9UDR5 926 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 STK39Q9UEW8 545 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 FAM198AQ9UFP1 575 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 SUFUQ9UMX1 484 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 SSX2IPQ9Y2D8 614 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 TMED5Q9Y3A6 229 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 ZNF711Q9Y462 761 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 PCDHGA11Q9Y5H2 935 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 AP1M2Q9Y6Q5 423 aa3.82□□□□□ -1.8
SMG6-208ENST00000570874 CNTNAP1P78357 1384 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms