RNA–Protein interactions for RNA: ENST00000568698.5

CDH16-208, Transcript of cadherin 16, humanhuman

TSL 5

Gene CDH16, Length 2,026 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-208ENST00000568698 RHOT2Q8IXI1 618 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 AP1M1Q9BXS5 423 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 ATXN2Q99700 1313 aaKnown RBP17.62■□□□□ 0.41
CDH16-208ENST00000568698 BUB1BO60566 1050 aaPredicted RBP17.62■□□□□ 0.41
CDH16-208ENST00000568698 PTPN11Q06124 597 aaPredicted RBP17.62■□□□□ 0.41
CDH16-208ENST00000568698 RUFY4Q6ZNE9 571 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 LRRC71Q8N4P6 559 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 SLC7A3Q8WY07 619 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 PPM1EQ8WY54 764 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 ACCSQ96QU6 501 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 ATP6V0A4Q9HBG4 840 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 TMBIM4Q9HC24 238 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 GPRC5CQ9NQ84 441 aa17.62■□□□□ 0.41
CDH16-208ENST00000568698 UTP11Q9Y3A2 253 aaKnown RBP17.62■□□□□ 0.41
CDH16-208ENST00000568698 K7ENM7 598 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 PMM2O15305 246 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 TRIM49P0CI25 452 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 TRIM49CP0CI26 452 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 HSD17B3P37058 310 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 CCT5P48643 541 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 BIRC3Q13489 604 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 SLC39A5Q6ZMH5 540 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 MAEAQ7L5Y9 396 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 SLC17A8Q8NDX2 589 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 DDX47Q9H0S4 455 aaKnown RBP17.61■□□□□ 0.41
CDH16-208ENST00000568698 RAB17Q9H0T7 212 aa17.61■□□□□ 0.41
CDH16-208ENST00000568698 GOLGA6L10A0A0M3HER8 536 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 TRIM66O15016 1216 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 MAGEB2O15479 319 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 DDX3YO15523 660 aaKnown RBP17.6■□□□□ 0.41
CDH16-208ENST00000568698 MYZAPP0CAP1 466 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 SNX17Q15036 470 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 EFCAB12Q6NXP0 572 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 B4GALNT4Q76KP1 1039 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 KSR1Q8IVT5 923 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 LMO3Q8TAP4 145 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 TMEM143Q96AN5 459 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 AGPAT1Q99943 283 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 IKZF4Q9H2S9 585 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 ST6GALNAC4Q9H4F1 302 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 PLEKHA4Q9H4M7 779 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 TRMT13Q9NUP7 481 aaKnown RBP17.6■□□□□ 0.41
CDH16-208ENST00000568698 USP20Q9Y2K6 914 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 CLCN3P51790 818 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 ATN1P54259 1190 aaPredicted RBP17.6■□□□□ 0.41
CDH16-208ENST00000568698 TRADDQ15628 312 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 CEP85LQ5SZL2 805 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 C1orf53Q5VUE5 145 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 KCTD16Q68DU8 428 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 C11orf63Q6NUN7 778 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 DNAAF5Q86Y56 855 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 SH2D3CQ8N5H7 860 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 MCPH1Q8NEM0 835 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 WNT8BQ93098 351 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 C11orf49Q9H6J7 331 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 OSGEPQ9NPF4 335 aa17.6■□□□□ 0.41
CDH16-208ENST00000568698 A0A087WUV0 522 aaPredicted RBP17.59■□□□□ 0.41
CDH16-208ENST00000568698 MIF4GDA9UHW6 222 aaKnown RBP17.59■□□□□ 0.41
CDH16-208ENST00000568698 B4GALT4O60513 344 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 GNAT1P11488 350 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 ARL2P36404 184 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 VAMP7P51809 220 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 MCCD1P59942 119 aaPredicted RBP17.59■□□□□ 0.41
CDH16-208ENST00000568698 PTENP60484 403 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 PDCLQ13371 301 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 PHLDB3Q6NSJ2 640 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 SERINC5Q86VE9 423 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 FAM126BQ8IXS8 530 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 KIAA0319LQ8IZA0 1049 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 SEZ6LQ9BYH1 1024 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 TRPV6Q9H1D0 765 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.59■□□□□ 0.41
CDH16-208ENST00000568698 FAM187AA6NFU0 413 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 H0YGN5 161 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 GAS2O43903 313 aaKnown RBP17.59■□□□□ 0.41
CDH16-208ENST00000568698 FGGP02679 453 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 CYP2C9P11712 490 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 PLS3P13797 630 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 POU5F1Q01860 360 aaKnown RBP17.59■□□□□ 0.41
CDH16-208ENST00000568698 PTGISQ16647 500 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 FAM102BQ5T8I3 360 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 AGBL2Q5U5Z8 902 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 EXOC8Q8IYI6 725 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 RNPC3Q96LT9 517 aaKnown RBP17.59■□□□□ 0.41
CDH16-208ENST00000568698 JPH2Q9BR39 696 aaPredicted RBP17.59■□□□□ 0.41
CDH16-208ENST00000568698 EPN3Q9H201 632 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 AMACRQ9UHK6 382 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 NFS1Q9Y697 457 aa17.59■□□□□ 0.41
CDH16-208ENST00000568698 SMIM35A0A1B0GVV1 85 aa17.58■□□□□ 0.4
CDH16-208ENST00000568698 ITGA4P13612 1032 aa17.58■□□□□ 0.4
CDH16-208ENST00000568698 CTNNA1P35221 906 aaKnown RBP17.58■□□□□ 0.4
CDH16-208ENST00000568698 DHX34Q14147 1143 aaKnown RBP17.58■□□□□ 0.4
CDH16-208ENST00000568698 EPC2Q52LR7 807 aa17.58■□□□□ 0.4
CDH16-208ENST00000568698 NECAB2Q7Z6G3 386 aa17.58■□□□□ 0.4
CDH16-208ENST00000568698 ASAP3Q8TDY4 903 aa17.58■□□□□ 0.4
CDH16-208ENST00000568698 BSNDQ8WZ55 320 aa17.58■□□□□ 0.4
CDH16-208ENST00000568698 DHX38Q92620 1227 aaKnown RBP17.58■□□□□ 0.4
CDH16-208ENST00000568698 YY1AP1Q9H869 796 aa17.58■□□□□ 0.4
CDH16-208ENST00000568698 ALPK3Q96L96 1907 aa17.58■□□□□ 0.4
CDH16-208ENST00000568698 VGLL3A8MV65 326 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms