RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 SIDT1Q9NXL6 827 aaKnown RBP5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 TRPM5Q9NZQ8 1165 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 HSFX1Q9UBD0 423 aa5.01□□□□□ -1.61
HERPUD1-212ENST00000567944 A0A088AWK7 358 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 DIRC3C9JPN6 131 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 NARSO43776 548 aaKnown RBP5□□□□□ -1.61
HERPUD1-212ENST00000567944 CTNND1O60716 968 aaKnown RBP5□□□□□ -1.61
HERPUD1-212ENST00000567944 RPS6KA4O75676 772 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 NCR1O76036 304 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 AGFG2O95081 481 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 ARIH2O95376 493 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 MATN4O95460 622 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 FTH1P19P0C7X4 201 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 CKBP12277 381 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 FCER1AP12319 257 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 ALAS1P13196 640 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 AGFG1P52594 562 aaKnown RBP5□□□□□ -1.61
HERPUD1-212ENST00000567944 OCA2Q04671 838 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 PUM1Q14671 1186 aaKnown RBP eCLIP5□□□□□ -1.61
HERPUD1-212ENST00000567944 CCDC93Q567U6 631 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 UTP14CQ5TAP6 766 aaKnown RBP5□□□□□ -1.61
HERPUD1-212ENST00000567944 B3GNTL1Q67FW5 361 aaPredicted RBP5□□□□□ -1.61
HERPUD1-212ENST00000567944 SWSAP1Q6NVH7 229 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 CRIP3Q6Q6R5 217 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 ZNF365Q70YC5 407 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 ZNF276Q8N554 614 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 SH2D3CQ8N5H7 860 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 Q8NA96 180 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 TMIEQ8NEW7 156 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 TBC1D15Q8TC07 691 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 MARS2Q96GW9 593 aaKnown RBP5□□□□□ -1.61
HERPUD1-212ENST00000567944 NT5C1BQ96P26 610 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 ZSWIM1Q9BR11 485 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 TLR10Q9BXR5 811 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 AKIP1Q9NQ31 210 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 KMT5AQ9NQR1 393 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 SLC2A4RGQ9NR83 387 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 PNPOQ9NVS9 261 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 USP25Q9UHP3 1055 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 STXBP5LQ9Y2K9 1186 aa5□□□□□ -1.61
HERPUD1-212ENST00000567944 A0A1B0GTW7 788 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 VSTM5A8MXK1 200 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 E9PLN8 166 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 RECQL4O94761 1208 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 ZFPL1O95159 310 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 PEX11BO96011 259 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 AHSGP02765 367 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 CFIP05156 583 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 U2AF1L5P0DN76 240 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 FGFR4P22455 802 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 U2AF1Q01081 240 aaKnown RBP eCLIP4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 TUBA3CQ13748 450 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 GRM3Q14832 879 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 BEAN1Q3B7T3 259 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 TUBA3EQ6PEY2 450 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 KIAA0319LQ8IZA0 1049 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 NUP133Q8WUM0 1156 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 SLC25A43Q8WUT9 341 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 SLC35A4Q96G79 324 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 LRIG1Q96JA1 1093 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 CDK5RAP3Q96JB5 506 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 FAM193BQ96PV7 902 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 ADAM2Q99965 735 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 VKORC1Q9BQB6 163 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 PACSIN1Q9BY11 444 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 WDCPQ9H6R7 721 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 MAN1C1Q9NR34 630 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 MRPS18AQ9NVS2 196 aaKnown RBP4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 MAP3K2Q9Y2U5 619 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 PCDHA1Q9Y5I3 950 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 HS3ST4Q9Y661 456 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 AATKQ6ZMQ8 1374 aa4.99□□□□□ -1.61
HERPUD1-212ENST00000567944 GAGE12BA1L429 117 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 GAGE12HA6NDE8 117 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 TMEM200CA6NKL6 621 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 H3BUI4 141 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 GJB1P08034 283 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 SMARCA1P28370 1054 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 IL12RB1P42701 662 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 PIK3CGP48736 1102 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 USP14P54578 494 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 RAB1AP62820 205 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 GBX1Q14549 363 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 KIF22Q14807 665 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 ATP2B3Q16720 1220 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 NPNTQ6UXI9 565 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 MRGPREQ86SM8 312 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 MAPKAPK5Q8IW41 473 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 WDR75Q8IWA0 830 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 CAMKK1Q8N5S9 505 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 ZNF483Q8TF39 744 aaPredicted RBP4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 LENG9Q96B70 501 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 NACC2Q96BF6 587 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 FAM167AQ96KS9 214 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 MRGPRX1Q96LB2 322 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 VPS11Q9H270 941 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 TMEM60Q9H2L4 133 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 ARMT1Q9H993 441 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 ATP6V0A4Q9HBG4 840 aa4.98□□□□□ -1.61
HERPUD1-212ENST00000567944 OBP2AQ9NY56 170 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms