RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 IL15P40933 162 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 ACADVLP49748 655 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 HES6Q96HZ4 224 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 RNF41Q9H4P4 317 aaPredicted RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 KBTBD4Q9NVX7 518 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CDH7Q9ULB5 785 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 STX8Q9UNK0 236 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 COQ6Q9Y2Z9 468 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 MYPNQ86TC9 1320 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 E2F8A0AVK6 867 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 A6NJR5 290 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 CCDC22O60826 627 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 RNASEH1O60930 286 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 CD48P09326 243 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 GJC1P36383 396 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 RASSF2P50749 326 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SLC39A6Q13433 755 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ITGA7Q13683 1181 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 FLOT2Q14254 428 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 KYNUQ16719 465 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SPOUT1Q5T280 376 aaKnown RBP3.08□□□□□ -1.92
CHD9-218ENST00000566029 PACS1Q6VY07 963 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 RRAGAQ7L523 313 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 MICU3Q86XE3 530 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ATP11CQ8NB49 1132 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 TRPV6Q9H1D0 765 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 DPP7Q9UHL4 492 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 ASAP1Q9ULH1 1129 aa3.08□□□□□ -1.92
CHD9-218ENST00000566029 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.08□□□□□ -1.92
CHD9-218ENST00000566029 DCTN3O75935 186 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 KRT75O95678 551 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 KRT19P08727 400 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CREB1P16220 341 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 GTF2H1P32780 548 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CDC42EP1Q00587 391 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 DR1Q01658 176 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PLCB3Q01970 1234 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 NR5A1Q13285 461 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 RBM20Q5T481 1227 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 LRRC74BQ6ZQY2 392 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 MAP7D3Q8IWC1 876 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SLC7A5P1Q8MH63 180 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 METTL13Q8N6R0 699 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 RBM46Q8TBY0 533 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 ERP27Q96DN0 273 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 OMA1Q96E52 524 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ART5Q96L15 291 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 METTL22Q9BUU2 404 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 TRIM62Q9BVG3 475 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 EPB41L4AQ9HCS5 686 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 PHRF1Q9P1Y6 1649 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 PVALEFA0A1B0GWK0 134 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 FOXO6A8MYZ6 492 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SPECC1L-ADORA2AF8WAN1 911 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ZBTB24O43167 697 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 CRCPO75575 148 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SERPING1P05155 500 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CETPP11597 493 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PCSK6P29122 969 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 LPIN1Q14693 890 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PDK3Q15120 406 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 Q3C1V9 767 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ZC3H18Q86VM9 953 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 HACE1Q8IYU2 909 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 FAM133AQ8N9E0 248 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ARHGEF2Q92974 986 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 CCT7Q99832 543 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 USP40Q9NVE5 1235 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SAP30BPQ9UHR5 308 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 DBR1Q9UK59 544 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 PACSIN2Q9UNF0 486 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 R3HDM2Q9Y2K5 976 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 TIMM22Q9Y584 194 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 CASQ2O14958 399 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 GAS8O95995 478 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 STX2P32856 288 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ARF5P84085 180 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ARHGAP4P98171 946 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TCEA2Q15560 299 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SLC18A3Q16572 532 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ANKRD20A4Q4UJ75 823 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 ACSBG2Q5FVE4 666 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 OTUD6AQ7L8S5 288 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 RIBC1Q8N443 379 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 CITED2Q99967 270 aaPredicted RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 TUBB6Q9BUF5 446 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 PADI4Q9UM07 663 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 JAG2Q9Y219 1238 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 AFG3L2Q9Y4W6 797 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 FLT1P17948 1338 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 AFDNP55196 1824 aaKnown RBP3.07□□□□□ -1.92
CHD9-218ENST00000566029 PDE5AO76074 875 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 IL1BP01584 269 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SLC18A1P54219 525 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 GSTO1P78417 241 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 FRMPD4Q14CM0 1322 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 HLFQ16534 295 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 TXNRD1Q16881 649 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SMUG1Q53HV7 270 aa3.07□□□□□ -1.92
CHD9-218ENST00000566029 SH3D19Q5HYK7 790 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms