RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 KNOP1Q1ED39 458 aaKnown RBP15□□□□□ -0.01
HERPUD1-210ENST00000565966 SPATA1Q5VX52 437 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 JADE1Q6IE81 842 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 CES5AQ6NT32 575 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 PRSS55Q6UWB4 352 aaPredicted RBP15□□□□□ -0.01
HERPUD1-210ENST00000565966 BEST2Q8NFU1 509 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 SPATA20Q8TB22 786 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 SUSD6Q92537 303 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 ERCC4Q92889 916 aaPredicted RBP15□□□□□ -0.01
HERPUD1-210ENST00000565966 FBXL18Q96ME1 805 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 FAM213AQ9BRX8 229 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 APOL5Q9BWW9 433 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 ADAM7Q9H2U9 754 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 C2CD2Q9Y426 696 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 USP15Q9Y4E8 981 aaPredicted RBP15□□□□□ -0.01
HERPUD1-210ENST00000565966 PCDHA5Q9Y5H7 936 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 BDP1A6H8Y1 2624 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 DOCK6Q96HP0 2047 aa15□□□□□ -0.01
HERPUD1-210ENST00000565966 SYN3O14994 580 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 CLIC2O15247 247 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 EXTL3O43909 919 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 IL18RAPO95256 599 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 GLUD1P00367 558 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 RPL17P18621 184 aaKnown RBP14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 SNRPFP62306 86 aaKnown RBP14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 TMEM132DQ14C87 1099 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 ELMSAN1Q6PJG2 1045 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 PALB2Q86YC2 1186 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 NT5DC4Q86YG4 428 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 GLYCTKQ8IVS8 523 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 ADHFE1Q8IWW8 467 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 GPD1LQ8N335 351 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 HDAC7Q8WUI4 952 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 GSDMAQ96QA5 445 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 CLSTN3Q9BQT9 956 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 HSPBP1Q9NZL4 362 aa14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 HOOK1Q9UJC3 728 aaKnown RBP14.99□□□□□ -0.01
HERPUD1-210ENST00000565966 SPDYE4A6NLX3 237 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 I3L4J1 428 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 SMC2O95347 1197 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 NFICP08651 508 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 TKTP29401 623 aaKnown RBP14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 MCM4P33991 863 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 WNT7BP56706 349 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 CBX2Q14781 532 aaPredicted RBP14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 RARS2Q5T160 578 aaKnown RBP14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 LILRA6Q6PI73 481 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 ANKS3Q6ZW76 656 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 HS2ST1Q7LGA3 356 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 BRSK2Q8IWQ3 736 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 C12orf56Q8IXR9 622 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 GJD3Q8N144 294 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 TMEM130Q8N3G9 435 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 C12orf76Q8N812 135 aaPredicted RBP14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 SMARCE1Q969G3 411 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 SUSD3Q96L08 255 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 GBP4Q96PP9 640 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 POP1Q99575 1024 aaKnown RBP14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 KCTD10Q9H3F6 313 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 PLEKHA4Q9H4M7 779 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 SFXN1Q9H9B4 322 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 MAN1C1Q9NR34 630 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 CGNQ9P2M7 1197 aaKnown RBP14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 MTRRQ9UBK8 725 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 MUC3AQ02505 3323 aa14.98□□□□□ -0.01
HERPUD1-210ENST00000565966 C19orf67A6NJJ6 358 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 TGM5O43548 720 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 KIF20AO95235 890 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 PAX3P23760 479 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 MTHFRP42898 656 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 GUCY2FP51841 1108 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 ZP2Q05996 745 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 ATAT1Q5SQI0 421 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 C9orf57Q5W0N0 161 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 GUF1Q8N442 669 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 NOC3LQ8WTT2 800 aaKnown RBP14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 RIPOR3Q96MK2 946 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 NECTIN4Q96NY8 510 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 PHF7Q9BWX1 381 aaPredicted RBP14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 KIAA1586Q9HCI6 787 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 LMBRD1Q9NUN5 540 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 RMND1Q9NWS8 449 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 RBAKQ9NYW8 714 aaPredicted RBP14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 MAPK8IP1Q9UQF2 711 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 BACE2Q9Y5Z0 518 aa14.97□□□□□ -0.01
HERPUD1-210ENST00000565966 ZNF233A6NK53 670 aa14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 H7C4K7 107 aa14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 M0QZQ0 153 aa14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 PIRO00625 290 aa14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 PDXKO00764 312 aa14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 SPATA31D3P0C874 917 aa14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 SSTR3P32745 418 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 OR1D2P34982 312 aa14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 CYP2J2P51589 502 aa14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 RAB33AQ14088 237 aa14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 MRPL58Q14197 206 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 VARS2Q5ST30 1063 aaKnown RBP14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 ZNF658Q5TYW1 1059 aaPredicted RBP14.96□□□□□ -0.01
HERPUD1-210ENST00000565966 TMC5Q6UXY8 1006 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms