RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 SIAH1Q8IUQ4 282 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 AGGF1Q8N302 714 aaeCLIP21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MAML1Q92585 1016 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 GAKO14976 1311 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SNUPNO95149 360 aaKnown RBP21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ATP6V1C1P21283 382 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PEX3P56589 373 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SOX10P56693 466 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 TAS2R40P59535 323 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 CDR2Q01850 454 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ZBTB16Q05516 673 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 RBBP5Q15291 538 aaKnown RBP21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MAPK6Q16659 721 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 TRABD2AQ86V40 505 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 CCNJLQ8IV13 435 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ZNF577Q9BSK1 485 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 NEU2Q9Y3R4 380 aa21.74■■□□□ 1.07
MAP1LC3B-206ENST00000564844 KIF3CO14782 793 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 NVLO15381 856 aaKnown RBP21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 TCF4P15884 667 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 TSNAXIP1Q2TAA8 658 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SNX30Q5VWJ9 437 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 STXBP4Q6ZWJ1 553 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ASAP3Q8TDY4 903 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 C11orf70Q9BRQ4 267 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MAK16Q9BXY0 300 aaKnown RBP21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ARMCX1Q9P291 453 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 GTF3C4Q9UKN8 822 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 IGLV3-22A0A075B6J6 115 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 IL1R1P14778 569 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 GCAP28676 217 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 JAG1P78504 1218 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 FAM71AQ8IYT1 594 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ZC3H12CQ9C0D7 883 aaKnown RBP21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ARL8BQ9NVJ2 186 aa21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SAE1Q9UBE0 346 aaPredicted RBP21.73■■□□□ 1.07
MAP1LC3B-206ENST00000564844 CAPN9O14815 690 aa21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MKRN3Q13064 507 aaKnown RBP21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MOGSQ13724 837 aa21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PTK6Q13882 451 aa21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 NRG4Q8WWG1 115 aa21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SCG3Q8WXD2 468 aaKnown RBP21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PLVAPQ9BX97 442 aa21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 TBX3O15119 743 aa21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SP100P23497 879 aaPredicted RBP21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 YARSP54577 528 aaKnown RBP21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 GPS1Q13098 491 aa21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 XXYLT1Q8NBI6 393 aa21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 CADM1Q9BY67 442 aaKnown RBP21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ADGRA3Q8IWK6 1321 aa21.72■■□□□ 1.07
MAP1LC3B-206ENST00000564844 IRF6O14896 467 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 CYP1A2P05177 515 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PECAM1P16284 738 aaPredicted RBP21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 HADHBP55084 474 aaKnown RBP21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 TTC7BQ86TV6 843 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 LRRC6Q86X45 466 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 NACC1Q96RE7 527 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 DNPEPQ9ULA0 475 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 EDF1O60869 148 aaKnown RBP21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ATP9AO75110 1047 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 WDR60Q8WVS4 1066 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 C10orf82Q8WW14 230 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ZNF75CPQ92670 426 aaPredicted RBP21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 HEY2Q9UBP5 337 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 MARK3P27448 753 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 SSTR1P30872 391 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 PRELPP51888 382 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 DYNLT1P63172 113 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 STAT4Q14765 748 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 VPS52Q8N1B4 723 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 STARD13Q9Y3M8 1113 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 WASF2Q9Y6W5 498 aa21.71■■□□□ 1.07
MAP1LC3B-206ENST00000564844 ECE1P42892 770 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 FAM163AQ96GL9 167 aaPredicted RBP21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 CYTH2Q99418 400 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MROH7Q68CQ1 1323 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PSMD10O75832 226 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 DCTN3O75935 186 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SERPINB2P05120 415 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 GZMAP12544 262 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ADRA2BP18089 450 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ATP2B4P23634 1241 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ARSEP51690 589 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MFAP3P55082 362 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PARP6Q2NL67 630 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ACSBG2Q5FVE4 666 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 C12orf50Q8NA57 414 aaPredicted RBP21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MCUR1Q96AQ8 359 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 GRAMD1AQ96CP6 724 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 OSBPL8Q9BZF1 889 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 GLT8D2Q9H1C3 349 aa21.7■■□□□ 1.06
MAP1LC3B-206ENST00000564844 MAST2Q6P0Q8 1798 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 GH2P01242 217 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 FDX1P10109 184 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 GYS1P13807 737 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 PDIA2Q13087 525 aaKnown RBP21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 SPOPLQ6IQ16 392 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ACAD10Q6JQN1 1059 aa21.69■■□□□ 1.06
MAP1LC3B-206ENST00000564844 ISLR2Q6UXK2 745 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms