RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ELAVL1Q15717 326 aaKnown RBP5.8□□□□□ -1.48
LINC00560-201ENST00000564593 CNGA2Q16280 664 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 TBC1D10BQ4KMP7 808 aaPredicted RBP5.8□□□□□ -1.48
LINC00560-201ENST00000564593 UBXN11Q5T124 520 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 ATXN7L2Q5T6C5 722 aaPredicted RBP5.8□□□□□ -1.48
LINC00560-201ENST00000564593 TCTN3Q6NUS6 607 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 EFCAB12Q6NXP0 572 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 ELOA2Q8IYF1 753 aaPredicted RBP5.8□□□□□ -1.48
LINC00560-201ENST00000564593 FAM186BQ8IYM0 893 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 D2HGDHQ8N465 521 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 ST8SIA2Q92186 375 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 GJA10Q969M2 543 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 MPHOSPH9Q99550 1183 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 BTBD1Q9H0C5 482 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 GSTO2Q9H4Y5 243 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 ZNF287Q9HBT7 754 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 NLRC4Q9NPP4 1024 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 JKAMPQ9P055 326 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 POGKQ9P215 609 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 CFAP97Q9P2B7 532 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 ZFR2Q9UPR6 939 aaKnown RBP5.8□□□□□ -1.48
LINC00560-201ENST00000564593 CORO2BQ9UQ03 480 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 SH3BP1Q9Y3L3 701 aa5.8□□□□□ -1.48
LINC00560-201ENST00000564593 A0A0G2JLL6 359 aaPredicted RBP5.79□□□□□ -1.48
LINC00560-201ENST00000564593 RAD17O75943 681 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 HAUS5O94927 633 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 PLATP00750 562 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 GJB1P08034 283 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 RPL17P18621 184 aaKnown RBP5.79□□□□□ -1.48
LINC00560-201ENST00000564593 SLC6A4P31645 630 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 HTR3AP46098 478 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 SUMO3P55854 103 aaPredicted RBP5.79□□□□□ -1.48
LINC00560-201ENST00000564593 FOXL1Q12952 345 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 EMC10Q5UCC4 262 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 ZNF365Q70YC5 407 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 GPRIN1Q7Z2K8 1008 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 FUKQ8N0W3 1084 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 AOPEPQ8N6M6 819 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 RNF169Q8NCN4 708 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 SUCLG2Q96I99 432 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 P2RX7Q99572 595 aaKnown RBP5.79□□□□□ -1.48
LINC00560-201ENST00000564593 POLR3GLQ9BT43 218 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 XYLT2Q9H1B5 865 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 FBXO34Q9NWN3 711 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 FAM30AQ9NZY2 134 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 CPNE7Q9UBL6 633 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 CLCA2Q9UQC9 943 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 DAAM1Q9Y4D1 1078 aa5.79□□□□□ -1.48
LINC00560-201ENST00000564593 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.79□□□□□ -1.48
LINC00560-201ENST00000564593 PRSS29PA6NIE9 313 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 TBX3O15119 743 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 IPO13O94829 963 aaKnown RBP5.78□□□□□ -1.48
LINC00560-201ENST00000564593 SERPINB3P29508 390 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 TM4SF4P48230 202 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 PRIM2P49643 509 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 FMO1Q01740 532 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 MORC3Q14149 939 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 KIF22Q14807 665 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 UTP14CQ5TAP6 766 aaKnown RBP5.78□□□□□ -1.48
LINC00560-201ENST00000564593 GLB1LQ6UWU2 654 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 CIR1Q86X95 450 aaPredicted RBP5.78□□□□□ -1.48
LINC00560-201ENST00000564593 MB21D1Q8N884 522 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 PCSK9Q8NBP7 692 aaKnown RBP5.78□□□□□ -1.48
LINC00560-201ENST00000564593 ACRBPQ8NEB7 543 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 MORC4Q8TE76 937 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 PGBD4Q96DM1 585 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 CCDC138Q96M89 665 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.78□□□□□ -1.48
LINC00560-201ENST00000564593 RLIMQ9NVW2 624 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 TAGLN3Q9UI15 199 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 SLC45A2Q9UMX9 530 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 SLC30A1Q9Y6M5 507 aa5.78□□□□□ -1.48
LINC00560-201ENST00000564593 KPNA5O15131 536 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 FOXS1O43638 330 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 GNAI2P04899 355 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 ZKSCAN1P17029 563 aaPredicted RBP5.77□□□□□ -1.49
LINC00560-201ENST00000564593 EN2P19622 333 aaPredicted RBP5.77□□□□□ -1.49
LINC00560-201ENST00000564593 PSMC1P62191 440 aaKnown RBP5.77□□□□□ -1.49
LINC00560-201ENST00000564593 VPS72Q15906 364 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 CSRP2Q16527 193 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 LIMS2Q7Z4I7 341 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 GSPT2Q8IYD1 628 aaKnown RBP5.77□□□□□ -1.49
LINC00560-201ENST00000564593 SPICE1Q8N0Z3 855 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 FITM2Q8N6M3 262 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 MDGA1Q8NFP4 955 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 OR6B3Q8NGW1 331 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 KBTBD7Q8WVZ9 684 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 CPEB1Q9BZB8 566 aaKnown RBP5.77□□□□□ -1.49
LINC00560-201ENST00000564593 ADAM7Q9H2U9 754 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 RIPOR2Q9Y4F9 1068 aa5.77□□□□□ -1.49
LINC00560-201ENST00000564593 CDHR4A6H8M9 788 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 GPR42O15529 346 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 ANXA1P04083 346 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 RARBP10826 455 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 HK1P19367 917 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 SLC6A2P23975 617 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 MGAT1P26572 445 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 CASP5P51878 434 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 ARFIP2P53365 341 aa5.76□□□□□ -1.49
LINC00560-201ENST00000564593 HHEXQ03014 270 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms