RNA–Protein interactions for RNA: ENST00000563239.1

UBR1-204, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-204ENST00000563239 CYP2J2P51589 502 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 CLCN4P51793 760 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 MRPS5P82675 430 aaKnown RBP9.26□□□□□ -0.93
UBR1-204ENST00000563239 MRPL58Q14197 206 aaKnown RBP9.26□□□□□ -0.93
UBR1-204ENST00000563239 ZCWPW2Q504Y3 356 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 C9orf57Q5W0N0 161 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 LLGL2Q6P1M3 1020 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 LILRA6Q6PI73 481 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 SYCE2Q6PIF2 218 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.26□□□□□ -0.93
UBR1-204ENST00000563239 SLC9A9Q8IVB4 645 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 GUF1Q8N442 669 aaKnown RBP9.26□□□□□ -0.93
UBR1-204ENST00000563239 C1orf127Q8N9H9 656 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 XXYLT1Q8NBI6 393 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 BEST2Q8NFU1 509 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 OR5B17Q8NGF7 314 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 PLEKHO2Q8TD55 490 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 PIK3R5Q8WYR1 880 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 PPP2R3CQ969Q6 453 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 BORCS6Q96GS4 357 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 SUSD3Q96L08 255 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 MFSD14AQ96MC6 490 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 GSDMAQ96QA5 445 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 CLSTN3Q9BQT9 956 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 TTPALQ9BTX7 342 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 S1PR5Q9H228 398 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 LMBRD1Q9NUN5 540 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 DPP3Q9NY33 737 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 FNIP2Q9P278 1114 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 CGNQ9P2M7 1197 aaKnown RBP9.26□□□□□ -0.93
UBR1-204ENST00000563239 TRAF3IP3Q9Y228 551 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 BDP1A6H8Y1 2624 aa9.26□□□□□ -0.93
UBR1-204ENST00000563239 MUC3AQ02505 3323 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 GRXCR2A6NFK2 248 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 ZNF233A6NK53 670 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 M0QZQ0 153 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 KINO60870 393 aaKnown RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 CA8P35219 290 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 PRCPP42785 496 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 CASP4P49662 377 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 NDUFV1P49821 464 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 LILRA4P59901 499 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 CYP24A1Q07973 514 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 ELAVL2Q12926 359 aaKnown RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 BMS1Q14692 1282 aaKnown RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 PSMD6Q15008 389 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 CLUL1Q15846 466 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 SNRNP35Q16560 246 aaKnown RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 COBLL1Q53SF7 1204 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 ZNF658Q5TYW1 1059 aaPredicted RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 LMBRD2Q68DH5 695 aaPredicted RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 KIAA1841Q6NSI8 718 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 ANKRD54Q6NXT1 300 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 EP400NLQ6ZTU2 488 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 HS2ST1Q7LGA3 356 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 CEP57Q86XR8 500 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 NT5DC4Q86YG4 428 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 RDH13Q8NBN7 331 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 GOLGA5Q8TBA6 731 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 NOC3LQ8WTT2 800 aaKnown RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 ZNF516Q92618 1163 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 SMARCE1Q969G3 411 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 CCDC47Q96A33 483 aaKnown RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 POP1Q99575 1024 aaKnown RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 EMILIN2Q9BXX0 1053 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 KIAA1586Q9HCI6 787 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 INTS13Q9NVM9 706 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 MTRRQ9UBK8 725 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 SIX4Q9UIU6 781 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 MAN1B1Q9UKM7 699 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 SSX2IPQ9Y2D8 614 aa9.25□□□□□ -0.93
UBR1-204ENST00000563239 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.25□□□□□ -0.93
UBR1-204ENST00000563239 PLXNA3P51805 1871 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 SYN3O14994 580 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 MBTPS2O43462 519 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 TGM5O43548 720 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 XPOTO43592 962 aaKnown RBP9.24□□□□□ -0.93
UBR1-204ENST00000563239 TRAPPC3O43617 180 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 SMC2O95347 1197 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 PAPLNO95428 1278 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 NR3C1P04150 777 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 IL9P15248 144 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
UBR1-204ENST00000563239 KLRC2P26717 231 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 MCM4P33991 863 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 PMS1P54277 932 aaKnown RBP9.24□□□□□ -0.93
UBR1-204ENST00000563239 MCCD1P59942 119 aaPredicted RBP9.24□□□□□ -0.93
UBR1-204ENST00000563239 TFAMQ00059 246 aaKnown RBP9.24□□□□□ -0.93
UBR1-204ENST00000563239 MORC3Q14149 939 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 MYBPC2Q14324 1141 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 PSMD5Q16401 504 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 NFIL3Q16649 462 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 TJAP1Q5JTD0 557 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 VARS2Q5ST30 1063 aaKnown RBP9.24□□□□□ -0.93
UBR1-204ENST00000563239 C1orf220Q5T0J3 134 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 ISM2Q6H9L7 571 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 PTCRAQ6ISU1 281 aaPredicted RBP9.24□□□□□ -0.93
UBR1-204ENST00000563239 PALB2Q86YC2 1186 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 ADSSL1Q8N142 457 aa9.24□□□□□ -0.93
UBR1-204ENST00000563239 C12orf76Q8N812 135 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms