RNA–Protein interactions for RNA: ENST00000562956.1

LINC00838-201, long intergenic non-protein coding RNA 838, humanhuman

TSL 1 (best) BASIC

Gene LINC00838, Length 2,936 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00838-201ENST00000562956 SGSM1Q2NKQ1 1148 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 JADE1Q6IE81 842 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF410Q86VK4 478 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 MMGT1Q8N4V1 131 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 UBR7Q8N806 425 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 CPA5Q8WXQ8 436 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 ANKRD36BP1Q96IX9 119 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 DOCK3Q8IZD9 2030 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 EVPLQ92817 2033 aa10.07□□□□□ -0.8
LINC00838-201ENST00000562956 A0A1B0GUA9 196 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 MBLAC1A4D2B0 266 aaPredicted RBP10.06□□□□□ -0.8
LINC00838-201ENST00000562956 TULP2O00295 520 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 TBC1D8O95759 1140 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 TNNC2P02585 160 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CYP1A2P05177 515 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CPT1AP50416 773 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF200P98182 395 aaPredicted RBP10.06□□□□□ -0.8
LINC00838-201ENST00000562956 BRD3Q15059 726 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 SLC10A6Q3KNW5 377 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF677Q86XU0 584 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 TRPV1Q8NER1 839 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 HDAC7Q8WUI4 952 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF653Q96CK0 615 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 LRRC1Q9BTT6 524 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 AP5M1Q9H0R1 490 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 SIX4Q9UIU6 781 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 AMFRQ9UKV5 643 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 HAS3O00219 553 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CES2O00748 559 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CA12O43570 354 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ZMYND10O75800 440 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CYP2C9P11712 490 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CD58P19256 250 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 GNA15P30679 374 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 PSEN2P49810 448 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ADAM17P78536 824 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF699Q32M78 642 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 WDR93Q6P2C0 686 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 C1orf127Q8N9H9 656 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CYFIP2Q96F07 1278 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 HINFPQ9BQA5 517 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 NUP85Q9BW27 656 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 NIF3L1Q9GZT8 377 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ARFGAP3Q9NP61 516 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 DCAF8L1A6NGE4 600 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 DDX3YO15523 660 aaKnown RBP10.06□□□□□ -0.8
LINC00838-201ENST00000562956 TREHO43280 583 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CEP104O60308 925 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CYP1A1P04798 512 aaPredicted RBP10.06□□□□□ -0.8
LINC00838-201ENST00000562956 KRT19P08727 400 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 WEE2P0C1S8 567 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 HOXA11P31270 313 aaPredicted RBP10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ASPAP45381 313 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF132P52740 706 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 C2CD6Q53TS8 623 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 NAA35Q5VZE5 725 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CYP4F22Q6NT55 531 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 SCARA5Q6ZMJ2 495 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 PASD1Q8IV76 773 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 PBKQ96KB5 322 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 BTBD6Q96KE9 485 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 OSMRQ99650 979 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 CISHQ9NSE2 258 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 GTF3C4Q9UKN8 822 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 Q9Y3F1 56 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 ALG6Q9Y672 507 aa10.06□□□□□ -0.8
LINC00838-201ENST00000562956 SMIM35A0A1B0GVV1 85 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 TARSL2A2RTX5 802 aaKnown RBP10.05□□□□□ -0.8
LINC00838-201ENST00000562956 MYADML2A6NDP7 307 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 TMEM110-MUSTN1A8MSY1 372 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 MTA2O94776 668 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 PSMC4P43686 418 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 FSCN1Q16658 493 aaKnown RBP10.05□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF394Q53GI3 561 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 DCAF12L1Q5VU92 463 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 C11orf63Q6NUN7 778 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 MCOLN2Q8IZK6 566 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 USP38Q8NB14 1042 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 CXorf38Q8TB03 319 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 ZNF564Q8TBZ8 553 aaPredicted RBP10.05□□□□□ -0.8
LINC00838-201ENST00000562956 HNRNPLLQ8WVV9 542 aaKnown RBP10.05□□□□□ -0.8
LINC00838-201ENST00000562956 DNAJB3Q8WWF6 145 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 LCMT1Q9UIC8 334 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 GABRQQ9UN88 632 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 POLIQ9UNA4 740 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 ZSWIM8A7E2V4 1837 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 THAP12O43422 761 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 SASH3O75995 380 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 MESDQ14696 234 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 LONRF2Q1L5Z9 754 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 BEND6Q5SZJ8 279 aaPredicted RBP10.05□□□□□ -0.8
LINC00838-201ENST00000562956 PHLDB2Q86SQ0 1253 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 CPNE8Q86YQ8 564 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 ACTRT1Q8TDG2 376 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 GCOM2Q9BZD3 368 aaPredicted RBP10.05□□□□□ -0.8
LINC00838-201ENST00000562956 CXCL16Q9H2A7 254 aa10.05□□□□□ -0.8
LINC00838-201ENST00000562956 NXF1Q9UBU9 619 aaKnown RBP10.05□□□□□ -0.8
LINC00838-201ENST00000562956 CNOT8Q9UFF9 292 aaKnown RBP10.05□□□□□ -0.8
LINC00838-201ENST00000562956 TMEM88BA6NKF7 163 aa10.04□□□□□ -0.8
LINC00838-201ENST00000562956 ITGB3P05106 788 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms