RNA–Protein interactions for RNA: ENST00000560445.1

TPM1-223, Transcript of tropomyosin 1, humanhuman

TSL 3 BASIC

Gene TPM1, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-223ENST00000560445 CACNA1HO95180 2353 aa15.31■□□□□ 0.04
TPM1-223ENST00000560445 A0A0B4J269 797 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 OR6C75A6NL08 312 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 STK25O00506 426 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 STX6O43752 255 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 ABLIM3O94929 683 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 CPB1P15086 417 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 VCPP55072 806 aaKnown RBP15.3■□□□□ 0.04
TPM1-223ENST00000560445 HTR4Q13639 388 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 SLC39A14Q15043 492 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 PTPAQ15257 358 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 DSTYKQ6XUX3 929 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 NT5DC4Q86YG4 428 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 HSCBQ8IWL3 235 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 TCEAL8Q8IYN2 117 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 PRSS33Q8NF86 280 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 DDX12PQ92771 950 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 C18orf25Q96B23 403 aaPredicted RBP15.3■□□□□ 0.04
TPM1-223ENST00000560445 SLC2A4RGQ9NR83 387 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 AFF4Q9UHB7 1163 aaKnown RBP15.3■□□□□ 0.04
TPM1-223ENST00000560445 FBXL5Q9UKA1 691 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 DSEQ9UL01 958 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 C2CD2Q9Y426 696 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 PCDHB13Q9Y5F0 798 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 CLIC4Q9Y696 253 aa15.3■□□□□ 0.04
TPM1-223ENST00000560445 I3L4J1 428 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 M0QZQ0 153 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 ADAM12O43184 909 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 N4BP1O75113 896 aaKnown RBP15.29■□□□□ 0.04
TPM1-223ENST00000560445 MICAL2O94851 1124 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 IL18RAPO95256 599 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 ODC1P11926 461 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 PTPN2P17706 415 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 AOC1P19801 751 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 MRE11P49959 708 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 MRPL58Q14197 206 aaKnown RBP15.29■□□□□ 0.04
TPM1-223ENST00000560445 TMEM132DQ14C87 1099 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 STK38Q15208 465 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 CYP4A22Q5TCH4 519 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 ADALQ6DHV7 355 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 CD300LGQ6UXG3 332 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 ATOH1Q92858 354 aaPredicted RBP15.29■□□□□ 0.04
TPM1-223ENST00000560445 FGF13Q92913 245 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 CUEDC2Q9H467 287 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 MRPL44Q9H9J2 332 aaKnown RBP15.29■□□□□ 0.04
TPM1-223ENST00000560445 CYP4F11Q9HBI6 524 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 OLFML3Q9NRN5 406 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 TUBGCP4Q9UGJ1 667 aa15.29■□□□□ 0.04
TPM1-223ENST00000560445 OAZ2O95190 189 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 LDHAP00338 332 aaKnown RBP15.28■□□□□ 0.04
TPM1-223ENST00000560445 ADRB2P07550 413 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 TYMPP19971 482 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 AARSP49588 968 aaKnown RBP eCLIP15.28■□□□□ 0.04
TPM1-223ENST00000560445 ARPP19P56211 112 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 AMPD3Q01432 767 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 ZBTB6Q15916 424 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 ENOX2Q16206 610 aaKnown RBP15.28■□□□□ 0.04
TPM1-223ENST00000560445 IER5LQ5T953 404 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 SPATA1Q5VX52 437 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 PHLDB3Q6NSJ2 640 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 ARMCX5Q6P1M9 558 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 PDZD4Q76G19 769 aaPredicted RBP15.28■□□□□ 0.04
TPM1-223ENST00000560445 CCDC65Q8IXS2 484 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 POMGNT1Q8WZA1 660 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 SNX21Q969T3 373 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 FAM212AQ96EL1 285 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 EPSTI1Q96J88 318 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 ZNF512Q96ME7 567 aaPredicted RBP15.28■□□□□ 0.04
TPM1-223ENST00000560445 ACCSQ96QU6 501 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 ARHGEF3Q9NR81 526 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 CPSF3Q9UKF6 684 aaKnown RBP15.28■□□□□ 0.04
TPM1-223ENST00000560445 AGO2Q9UKV8 859 aaKnown RBP15.28■□□□□ 0.04
TPM1-223ENST00000560445 INSL5Q9Y5Q6 135 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 NUMBLQ9Y6R0 609 aa15.28■□□□□ 0.04
TPM1-223ENST00000560445 WDR27A2RRH5 827 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 LACTBL1A8MY62 500 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 KIAA0391O15091 583 aaKnown RBP15.27■□□□□ 0.04
TPM1-223ENST00000560445 TBC1D4O60343 1298 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 FGF19O95750 216 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 PDGFBP01127 241 aaPredicted RBP15.27■□□□□ 0.04
TPM1-223ENST00000560445 RHOP08100 348 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 CFHP08603 1231 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 PNPLA4P41247 253 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 NASPP49321 788 aaPredicted RBP15.27■□□□□ 0.04
TPM1-223ENST00000560445 CEBPZQ03701 1054 aaKnown RBP15.27■□□□□ 0.04
TPM1-223ENST00000560445 GRIN1Q05586 938 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 TCF15Q12870 199 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 MYBPC2Q14324 1141 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 SEZ6Q53EL9 994 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 DYMQ7RTS9 669 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 ZNF720Q7Z2F6 126 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 ALYREFQ86V81 257 aaKnown RBP15.27■□□□□ 0.04
TPM1-223ENST00000560445 METTL23Q86XA0 190 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 SYCP3Q8IZU3 236 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 ZNF560Q96MR9 790 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 PYM1Q9BRP8 204 aaKnown RBP15.27■□□□□ 0.04
TPM1-223ENST00000560445 GPR88Q9GZN0 384 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 TMEM206Q9H813 350 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 HSFX1Q9UBD0 423 aa15.27■□□□□ 0.04
TPM1-223ENST00000560445 MTMR6Q9Y217 621 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms