RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 PIRO00625 290 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 ADAM12O43184 909 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 EXOC3O60645 756 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 EPCAMP16422 314 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 AARSP49588 968 aaKnown RBP eCLIP21.11■□□□□ 0.97
SHF-205ENST00000559566 PMS1P54277 932 aaKnown RBP21.11■□□□□ 0.97
SHF-205ENST00000559566 RSPO2Q6UXX9 243 aaPredicted RBP21.11■□□□□ 0.97
SHF-205ENST00000559566 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.11■□□□□ 0.97
SHF-205ENST00000559566 SLC9A9Q8IVB4 645 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 C1orf127Q8N9H9 656 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 GOLGA5Q8TBA6 731 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 GPT2Q8TD30 523 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 TMEM174Q8WUU8 243 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 SUSD3Q96L08 255 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 POP1Q99575 1024 aaKnown RBP21.11■□□□□ 0.97
SHF-205ENST00000559566 CDCA3Q99618 268 aaPredicted RBP21.11■□□□□ 0.97
SHF-205ENST00000559566 MTMR12Q9C0I1 747 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 KIAA1586Q9HCI6 787 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 DPP3Q9NY33 737 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 COG5Q9UP83 839 aa21.11■□□□□ 0.97
SHF-205ENST00000559566 XPOTO43592 962 aaKnown RBP21.1■□□□□ 0.97
SHF-205ENST00000559566 MCM4P33991 863 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 KCNQ1P51787 676 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 MORC3Q14149 939 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 PSMD6Q15008 389 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 CLUL1Q15846 466 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 COBLL1Q53SF7 1204 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 KIAA1841Q6NSI8 718 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 GLYCTKQ8IVS8 523 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 ADSSL1Q8N142 457 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 PIK3R5Q8WYR1 880 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 MSLNLQ96KJ4 702 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 MFSD14AQ96MC6 490 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 CLSTN2Q9H4D0 955 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 INTS13Q9NVM9 706 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 SIX4Q9UIU6 781 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 NUB1Q9Y5A7 615 aa21.1■□□□□ 0.97
SHF-205ENST00000559566 CALUO43852 315 aaPredicted RBP21.09■□□□□ 0.97
SHF-205ENST00000559566 CLCN4P51793 760 aa21.09■□□□□ 0.97
SHF-205ENST00000559566 ELAVL2Q12926 359 aaKnown RBP21.09■□□□□ 0.97
SHF-205ENST00000559566 BMS1Q14692 1282 aaKnown RBP21.09■□□□□ 0.97
SHF-205ENST00000559566 NT5DC4Q86YG4 428 aa21.09■□□□□ 0.97
SHF-205ENST00000559566 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.09■□□□□ 0.97
SHF-205ENST00000559566 ZNF516Q92618 1163 aa21.09■□□□□ 0.97
SHF-205ENST00000559566 CCDC127Q96BQ5 260 aa21.09■□□□□ 0.97
SHF-205ENST00000559566 EEF2KMTQ96G04 330 aa21.09■□□□□ 0.97
SHF-205ENST00000559566 BORCS6Q96GS4 357 aa21.09■□□□□ 0.97
SHF-205ENST00000559566 CLSTN3Q9BQT9 956 aa21.09■□□□□ 0.97
SHF-205ENST00000559566 TIMM13Q9Y5L4 95 aaPredicted RBP21.09■□□□□ 0.97
SHF-205ENST00000559566 VWA8A3KMH1 1905 aa21.09■□□□□ 0.97
SHF-205ENST00000559566 UNC80Q8N2C7 3258 aa21.09■□□□□ 0.97
SHF-205ENST00000559566 TRIM49BA6NDI0 452 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 NCK2O43639 380 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 KIF20AO95235 890 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 ITGB3P05106 788 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 DLATP10515 647 aaKnown RBP21.08■□□□□ 0.97
SHF-205ENST00000559566 POLR2BP30876 1174 aaKnown RBP21.08■□□□□ 0.97
SHF-205ENST00000559566 NDUFV1P49821 464 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 LILRA4P59901 499 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 PSMD5Q16401 504 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 NFIL3Q16649 462 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 CENPPQ6IPU0 288 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 TMEM184AQ6ZMB5 413 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 GPR65Q8IYL9 337 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 CGRRF1Q99675 332 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 EMILIN2Q9BXX0 1053 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 KIAA1468Q9P260 1216 aa21.08■□□□□ 0.97
SHF-205ENST00000559566 PPP1R3GB7ZBB8 358 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 M0QZQ0 153 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 AKAP3O75969 853 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 NR2F2P24468 414 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 KLRC2P26717 231 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 DLG4P78352 724 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 MRPL58Q14197 206 aaKnown RBP21.07■□□□□ 0.96
SHF-205ENST00000559566 MYBPC2Q14324 1141 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 LEXMQ3ZCV2 418 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 VARS2Q5ST30 1063 aaKnown RBP21.07■□□□□ 0.96
SHF-205ENST00000559566 CEP135Q66GS9 1140 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 ANKRD40Q6AI12 368 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 SYCE2Q6PIF2 218 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 WDR49Q8IV35 697 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 ATXN2LQ8WWM7 1075 aaKnown RBP21.07■□□□□ 0.96
SHF-205ENST00000559566 ASB2Q96Q27 587 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 FNIP2Q9P278 1114 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 MTRRQ9UBK8 725 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 CDH22Q9UJ99 828 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 PCDHB8Q9UN66 801 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 AGAP1Q9UPQ3 857 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 SSX2IPQ9Y2D8 614 aa21.07■□□□□ 0.96
SHF-205ENST00000559566 GTF3C5Q9Y5Q8 519 aaPredicted RBP21.07■□□□□ 0.96
SHF-205ENST00000559566 LRRIQ3A6PVS8 624 aaPredicted RBP21.06■□□□□ 0.96
SHF-205ENST00000559566 SYN3O14994 580 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 TRAPPC3O43617 180 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 TBC1D4O60343 1298 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 TMEM191BP0C7N4 346 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 SPATA31D3P0C874 917 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 SURF1Q15526 300 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 C1orf220Q5T0J3 134 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 ANKRD54Q6NXT1 300 aa21.06■□□□□ 0.96
SHF-205ENST00000559566 SPATA31D4Q6ZUB0 917 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms