RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 SLC45A2Q9UMX9 530 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 G3BP2Q9UN86 482 aaKnown RBP4.32□□□□□ -1.72
CASC4-210ENST00000559550 MAP3K2Q9Y2U5 619 aa4.32□□□□□ -1.72
CASC4-210ENST00000559550 AATKQ6ZMQ8 1374 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 E2F8A0AVK6 867 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 F2RL2O00254 374 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 RNASET2O00584 256 aaKnown RBP4.31□□□□□ -1.72
CASC4-210ENST00000559550 HAUS5O94927 633 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 AGFG2O95081 481 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 SCGB1D2O95969 90 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 ALDH2P05091 517 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 ALAS1P13196 640 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 MAP2K6P52564 334 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 OCA2Q04671 838 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 NFE2Q16621 373 aaPredicted RBP4.31□□□□□ -1.72
CASC4-210ENST00000559550 PGS1Q32NB8 556 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 BEAN1Q3B7T3 259 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 PABPC1LQ4VXU2 614 aaKnown RBP4.31□□□□□ -1.72
CASC4-210ENST00000559550 ATAT1Q5SQI0 421 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 MAPKAPK5Q8IW41 473 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 GRAMD1CQ8IYS0 662 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 FITM2Q8N6M3 262 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 TBC1D15Q8TC07 691 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 NTN5Q8WTR8 489 aaPredicted RBP4.31□□□□□ -1.72
CASC4-210ENST00000559550 LENG9Q96B70 501 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 RGMAQ96B86 450 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 MARS2Q96GW9 593 aaKnown RBP4.31□□□□□ -1.72
CASC4-210ENST00000559550 PRRX2Q99811 253 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 ADAM2Q99965 735 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 ANLNQ9NQW6 1124 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 VSX1Q9NZR4 365 aaPredicted RBP4.31□□□□□ -1.72
CASC4-210ENST00000559550 HSFX1Q9UBD0 423 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 DKK2Q9UBU2 259 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 FZD1Q9UP38 647 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 PCDHA3Q9Y5H8 950 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 HS3ST4Q9Y661 456 aa4.31□□□□□ -1.72
CASC4-210ENST00000559550 CENPVL1A0A0U1RR11 272 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 A0A1B0GTW7 788 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 GAGE12BA1L429 117 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 GAGE12HA6NDE8 117 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 DIRC3C9JPN6 131 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 FOXN1O15353 648 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 AP1G1O43747 822 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 RAMP2O60895 175 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 DTNBO60941 627 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 SLC43A1O75387 559 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 RFPL1O75677 317 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 FTLP02792 175 aaPredicted RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 CFIP05156 583 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 MTHFD1P11586 935 aaKnown RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 CKBP12277 381 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 FCER1AP12319 257 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 LAG3P18627 525 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 LPOP22079 712 aaPredicted RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 FGFR4P22455 802 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 HK3P52790 923 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 HSD11B2P80365 405 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 NOGQ13253 232 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 IFIT1BQ5T764 474 aaKnown RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 UTP14CQ5TAP6 766 aaKnown RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 B3GNTL1Q67FW5 361 aaPredicted RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 SLC4A10Q6U841 1118 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 EPM2AIP1Q7L775 607 aaPredicted RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 BHLHA9Q7RTU4 235 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 HEATR3Q7Z4Q2 680 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 C3orf20Q8ND61 904 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 CPEB3Q8NE35 698 aaKnown RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 HAS1Q92839 578 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 MYEOVQ96EZ4 313 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 CAMKK2Q96RR4 588 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 TLR10Q9BXR5 811 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 PACSIN1Q9BY11 444 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 PNMA8BQ9ULN7 279 aaPredicted RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 NOB1Q9ULX3 412 aaKnown RBP4.3□□□□□ -1.72
CASC4-210ENST00000559550 ATP11BQ9Y2G3 1177 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 FPGT-TNNI3KV9GXZ4 949 aa4.3□□□□□ -1.72
CASC4-210ENST00000559550 PRSS29PA6NIE9 313 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 UNC119BA6NIH7 251 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 TMEM200CA6NKL6 621 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 PPM1GO15355 546 aaPredicted RBP4.29□□□□□ -1.72
CASC4-210ENST00000559550 OFD1O75665 1012 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 RPLP2P05387 115 aaKnown RBP4.29□□□□□ -1.72
CASC4-210ENST00000559550 VCAM1P19320 739 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 BMP5P22003 454 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 KRTAP5-9P26371 169 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 CYP2C19P33261 490 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 RESTQ13127 1097 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 ATP2B3Q16720 1220 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 TIGD2Q4W5G0 525 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 B3GNT9Q6UX72 402 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 FAM90A1Q86YD7 464 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 VRK3Q8IV63 474 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 TMEM132CQ8N3T6 1108 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 TMIEQ8NEW7 156 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 NLGN4YQ8NFZ3 816 aaPredicted RBP4.29□□□□□ -1.72
CASC4-210ENST00000559550 DIS3LQ8TF46 1054 aaKnown RBP4.29□□□□□ -1.72
CASC4-210ENST00000559550 KLHL32Q96NJ5 620 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 MAP3K14Q99558 947 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 C1orf43Q9BWL3 253 aa4.29□□□□□ -1.72
CASC4-210ENST00000559550 JKAMPQ9P055 326 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms