RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ELAVL2Q12926 359 aaKnown RBP15.5■□□□□ 0.07
USP3-205ENST00000557884 EDRF1Q3B7T1 1238 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 RTP2Q5QGT7 225 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 SCARA3Q6AZY7 606 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 NT5DC4Q86YG4 428 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 WDR49Q8IV35 697 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 FAM186BQ8IYM0 893 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 C1orf127Q8N9H9 656 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 TMEM174Q8WUU8 243 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 RIN2Q8WYP3 895 aaPredicted RBP15.5■□□□□ 0.07
USP3-205ENST00000557884 PPP2R3CQ969Q6 453 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 ANKRD36BP1Q96IX9 119 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 TTPALQ9BTX7 342 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 MRPL17Q9NRX2 175 aaKnown RBP15.5■□□□□ 0.07
USP3-205ENST00000557884 STK39Q9UEW8 545 aa15.5■□□□□ 0.07
USP3-205ENST00000557884 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.5■□□□□ 0.07
USP3-205ENST00000557884 PLXNA4Q9HCM2 1894 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 ANO9A1A5B4 782 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 PIRO00625 290 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 CETN3O15182 167 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 TRAPPC3O43617 180 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 TNNC2P02585 160 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 KRT19P08727 400 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 PPP1R2P41236 205 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 DSG1Q02413 1049 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 LRRC63Q05C16 580 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 PAK1Q13153 545 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 DUOXA2Q1HG44 320 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 CCDC183Q5T5S1 534 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 KIAA0319Q5VV43 1072 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 PRSS55Q6UWB4 352 aaPredicted RBP15.49■□□□□ 0.07
USP3-205ENST00000557884 EP400NLQ6ZTU2 488 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 CSGALNACT2Q8N6G5 542 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 PRDM6Q9NQX0 595 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 CHST7Q9NS84 486 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 SIX4Q9UIU6 781 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 AGAP1Q9UPQ3 857 aa15.49■□□□□ 0.07
USP3-205ENST00000557884 LRRIQ3A6PVS8 624 aaPredicted RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 SPTLC1O15269 473 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 LINC01565O15544 149 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 LILRB3O75022 631 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 CNPP09543 421 aaKnown RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 TRIM49P0CI25 452 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 TRIM49CP0CI26 452 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 EPB41P11171 864 aaKnown RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 RPL17P18621 184 aaKnown RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 PSMC2P35998 433 aaKnown RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 LILRA4P59901 499 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 DLG4P78352 724 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 RBM10P98175 930 aaKnown RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 DUSP6Q16828 381 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 DPCR1Q3MIW9 517 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 TTI2Q6NXR4 508 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 LLGL2Q6P1M3 1020 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 DSTYKQ6XUX3 929 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 GLYCTKQ8IVS8 523 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 PARD3BQ8TEW8 1205 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 ZNF516Q92618 1163 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 SUSD3Q96L08 255 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 DUSP9Q99956 384 aaKnown RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 TIMM13Q9Y5L4 95 aaPredicted RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 TDRD15B5MCY1 1934 aaKnown RBP15.48■□□□□ 0.07
USP3-205ENST00000557884 MYO7AQ13402 2215 aa15.48■□□□□ 0.07
USP3-205ENST00000557884 CLASP2O75122 1294 aaKnown RBP15.47■□□□□ 0.07
USP3-205ENST00000557884 KRT13P13646 458 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 FGFR3P22607 806 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 NLRP12P59046 1061 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 RBP5P82980 135 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 FKBP3Q00688 224 aaKnown RBP15.47■□□□□ 0.07
USP3-205ENST00000557884 BFSP1Q12934 665 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 PSMD5Q16401 504 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 CAVIN1Q6NZI2 390 aaKnown RBP15.47■□□□□ 0.07
USP3-205ENST00000557884 TRAPPC11Q7Z392 1133 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 ZC3H3Q8IXZ2 948 aaKnown RBP15.47■□□□□ 0.07
USP3-205ENST00000557884 KLHL5Q96PQ7 755 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 EMILIN2Q9BXX0 1053 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 CLDND1Q9NY35 253 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 TMEM63CQ9P1W3 806 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 ITGA11Q9UKX5 1188 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 SSX2IPQ9Y2D8 614 aa15.47■□□□□ 0.07
USP3-205ENST00000557884 R3HCC1Q9Y3T6 440 aaKnown RBP15.47■□□□□ 0.07
USP3-205ENST00000557884 CITO14578 2027 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 BICDL2A1A5D9 508 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 MAPK13O15264 365 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 TEX28O15482 410 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 KLRC2P26717 231 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 AARSP49588 968 aaKnown RBP eCLIP15.46■□□□□ 0.07
USP3-205ENST00000557884 TAF6P49848 677 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 VAMP7P51809 220 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 BIRC3Q13489 604 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 VARS2Q5ST30 1063 aaKnown RBP15.46■□□□□ 0.07
USP3-205ENST00000557884 C1orf220Q5T0J3 134 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 RBM43Q6ZSC3 357 aaKnown RBP15.46■□□□□ 0.07
USP3-205ENST00000557884 INTS8Q75QN2 995 aaKnown RBP15.46■□□□□ 0.07
USP3-205ENST00000557884 MLKLQ8NB16 471 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 VN1R2Q8NFZ6 395 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 CXorf38Q8TB03 319 aa15.46■□□□□ 0.07
USP3-205ENST00000557884 LNX1Q8TBB1 728 aaPredicted RBP15.46■□□□□ 0.07
USP3-205ENST00000557884 TMC2Q8TDI7 906 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms