RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 CEP135Q66GS9 1140 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 ANKRD40Q6AI12 368 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 ANKS3Q6ZW76 656 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 FAM186BQ8IYM0 893 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 SMYD4Q8IYR2 804 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-234ENST00000557703 RDH13Q8NBN7 331 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 C18orf25Q96B23 403 aaPredicted RBP14.79□□□□□ -0.04
SHMT2-234ENST00000557703 CXCL16Q9H2A7 254 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 ENTPD7Q9NQZ7 604 aa14.79□□□□□ -0.04
SHMT2-234ENST00000557703 ANK1P16157 1881 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 M0QZQ0 153 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 RFXAPO00287 272 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 BIN1O00499 593 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 AKAP3O75969 853 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 CXCL14O95715 111 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 STAU1O95793 577 aaKnown RBP14.78□□□□□ -0.04
SHMT2-234ENST00000557703 SRGAP2BP0DMP2 458 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 TYMPP19971 482 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 FGFR3P22607 806 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 ATICP31939 592 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 TAF6P49848 677 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 LILRA4P59901 499 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 COL19A1Q14993 1142 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 SV2CQ496J9 727 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 KIAA0319Q5VV43 1072 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 TTI2Q6NXR4 508 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 ELMSAN1Q6PJG2 1045 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 SASS6Q6UVJ0 657 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 RTL10Q7L3V2 364 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 DPH6Q7L8W6 267 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 FRMD5Q7Z6J6 570 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 TMEM173Q86WV6 379 aaPredicted RBP14.78□□□□□ -0.04
SHMT2-234ENST00000557703 EFCAB13Q8IY85 973 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 NOC3LQ8WTT2 800 aaKnown RBP14.78□□□□□ -0.04
SHMT2-234ENST00000557703 NELFBQ8WX92 580 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 PIK3R5Q8WYR1 880 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 FAXDC2Q96IV6 333 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 PAAF1Q9BRP4 392 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 GPR62Q9BZJ7 368 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 RXFP1Q9HBX9 757 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 MAFFQ9ULX9 164 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 COG5Q9UP83 839 aa14.78□□□□□ -0.04
SHMT2-234ENST00000557703 C2orf71A6NGG8 1288 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 H7C4K7 107 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 LILRB3O75022 631 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 DLATP10515 647 aaKnown RBP14.77□□□□□ -0.05
SHMT2-234ENST00000557703 CD44P16070 742 aaKnown RBP14.77□□□□□ -0.05
SHMT2-234ENST00000557703 DNAJB1P25685 340 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 VAMP7P51809 220 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 MARSP56192 900 aaKnown RBP14.77□□□□□ -0.05
SHMT2-234ENST00000557703 ERVFC1P60507 584 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 BFSP1Q12934 665 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 CSGALNACT2Q8N6G5 542 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 C1orf127Q8N9H9 656 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 ZSWIM2Q8NEG5 633 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 HDAC7Q8WUI4 952 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 BCL7CQ8WUZ0 217 aaPredicted RBP14.77□□□□□ -0.05
SHMT2-234ENST00000557703 TAF4BQ92750 862 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 TLE6Q9H808 572 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 VRTNQ9H8Y1 702 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 GOLGA2P5Q9HBQ8 144 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 ANO10Q9NW15 660 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 GDAP2Q9NXN4 497 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 TUBGCP4Q9UGJ1 667 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 PCDHB8Q9UN66 801 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 BACE2Q9Y5Z0 518 aa14.77□□□□□ -0.05
SHMT2-234ENST00000557703 PLXNA4Q9HCM2 1894 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 PMM2O15305 246 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 OAZ2O95190 189 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 ADH1AP07327 375 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 PTPN14Q15678 1187 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 FAM171A1Q5VUB5 890 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 SMYD5Q6GMV2 418 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 ISM2Q6H9L7 571 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 CD300LGQ6UXG3 332 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 TMEM184AQ6ZMB5 413 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 TRAPPC11Q7Z392 1133 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 TMEM86AQ8N2M4 240 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 EFHBQ8N7U6 833 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 MAFAQ8NHW3 353 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-234ENST00000557703 CCDC127Q96BQ5 260 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 BORCS6Q96GS4 357 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 VN1R3Q9BXE9 311 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 FAM124BQ9H5Z6 455 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-234ENST00000557703 ARMCX3Q9UH62 379 aaPredicted RBP14.76□□□□□ -0.05
SHMT2-234ENST00000557703 BRWD1Q9NSI6 2320 aa14.76□□□□□ -0.05
SHMT2-234ENST00000557703 KPNA7A9QM74 516 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 CAVIN2O95810 425 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 ITGB3P05106 788 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 CYP11A1P05108 521 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 CCDC192P0DO97 292 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 ODC1P11926 461 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 CASP4P49662 377 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 SPAG1Q07617 926 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 SMARCB1Q12824 385 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 TRPC3Q13507 836 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 MRPL58Q14197 206 aaKnown RBP14.75□□□□□ -0.05
SHMT2-234ENST00000557703 DUSP6Q16828 381 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 ZACNQ401N2 412 aa14.75□□□□□ -0.05
SHMT2-234ENST00000557703 KLHL10Q6JEL2 608 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms