RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 ITGAMP11215 1152 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 MTHFD1P11586 935 aaKnown RBP6.5□□□□□ -1.37
GPHN-215ENST00000557654 MALP21145 153 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 SCAPQ12770 1279 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 GPR149Q86SP6 731 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 TTC7BQ86TV6 843 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 NLGN4YQ8NFZ3 816 aaPredicted RBP6.5□□□□□ -1.37
GPHN-215ENST00000557654 NUP133Q8WUM0 1156 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 HSPBAP1Q96EW2 488 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 PACSIN1Q9BY11 444 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 GTPBP4Q9BZE4 634 aaKnown RBP6.5□□□□□ -1.37
GPHN-215ENST00000557654 RNF181Q9P0P0 153 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 CALCOCO1Q9P1Z2 691 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 CDYLQ9Y232 598 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 MTO1Q9Y2Z2 717 aaKnown RBP6.5□□□□□ -1.37
GPHN-215ENST00000557654 PCDHA3Q9Y5H8 950 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 NOX1Q9Y5S8 564 aa6.5□□□□□ -1.37
GPHN-215ENST00000557654 WDR33Q9C0J8 1336 aaKnown RBP6.5□□□□□ -1.37
GPHN-215ENST00000557654 SHROOM4Q9ULL8 1493 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 F2RL2O00254 374 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 B3GALT2O43825 422 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 ERN1O75460 977 aaKnown RBP6.49□□□□□ -1.37
GPHN-215ENST00000557654 POU2F2P09086 479 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 PF4V1P10720 104 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 PROZP22891 400 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 TTF1Q15361 905 aaPredicted RBP6.49□□□□□ -1.37
GPHN-215ENST00000557654 GEN1Q17RS7 908 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 SPDYE7PQ495Y7 208 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 HECTD2Q5U5R9 776 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 LCORLQ8N3X6 602 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 NSUN7Q8NE18 718 aaKnown RBP6.49□□□□□ -1.37
GPHN-215ENST00000557654 TMIEQ8NEW7 156 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 IL17RDQ8NFM7 739 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 KLHL32Q96NJ5 620 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 CYP4F11Q9HBI6 524 aa6.49□□□□□ -1.37
GPHN-215ENST00000557654 PIPSLA2A3N6 862 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 NT5C1B-RDH14C9J2C7 533 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 SLC43A1O75387 559 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 FOSP01100 380 aaPredicted RBP6.48□□□□□ -1.37
GPHN-215ENST00000557654 GCP02774 474 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 EGR2P11161 476 aaPredicted RBP6.48□□□□□ -1.37
GPHN-215ENST00000557654 COL10A1Q03692 680 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 MCL1Q07820 350 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 CYP2A13Q16696 494 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 CRB2Q5IJ48 1285 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 FOXR2Q6PJQ5 311 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 SLC4A10Q6U841 1118 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 USP45Q70EL2 814 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 ZNF365Q70YC5 407 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 PRR18Q8N4B5 295 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 PNKPQ96T60 521 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 C1orf43Q9BWL3 253 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 TYW1Q9NV66 732 aaKnown RBP6.48□□□□□ -1.37
GPHN-215ENST00000557654 JKAMPQ9P055 326 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 KCNE5Q9UJ90 142 aa6.48□□□□□ -1.37
GPHN-215ENST00000557654 PHKA1P46020 1223 aa6.47□□□□□ -1.37
GPHN-215ENST00000557654 MXRA7P84157 204 aa6.47□□□□□ -1.37
GPHN-215ENST00000557654 SLC44A3Q8N4M1 653 aa6.47□□□□□ -1.37
GPHN-215ENST00000557654 Q8NA96 180 aa6.47□□□□□ -1.37
GPHN-215ENST00000557654 IMPG2Q9BZV3 1241 aa6.47□□□□□ -1.37
GPHN-215ENST00000557654 SLITRK6Q9H5Y7 841 aa6.47□□□□□ -1.37
GPHN-215ENST00000557654 SLAMF7Q9NQ25 335 aa6.47□□□□□ -1.37
GPHN-215ENST00000557654 SYBUQ9NX95 663 aa6.47□□□□□ -1.37
GPHN-215ENST00000557654 TESQ9UGI8 421 aaKnown RBP6.47□□□□□ -1.37
GPHN-215ENST00000557654 ABLIM3O94929 683 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 FTLP02792 175 aaPredicted RBP6.46□□□□□ -1.38
GPHN-215ENST00000557654 RPLP2P05387 115 aaKnown RBP6.46□□□□□ -1.38
GPHN-215ENST00000557654 PLA2G5P39877 138 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 MAP2K6P52564 334 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 USP14P54578 494 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 FOXI1Q12951 378 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 NOGQ13253 232 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 KRTAP15-1Q3LI76 137 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 CCDC93Q567U6 631 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 RAVER1Q8IY67 606 aaKnown RBP6.46□□□□□ -1.38
GPHN-215ENST00000557654 PDPRQ8NCN5 879 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 C3orf20Q8ND61 904 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 SLC17A8Q8NDX2 589 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 RGMAQ96B86 450 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 Q96MF0 132 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 RTFDC1Q9BY42 306 aaPredicted RBP6.46□□□□□ -1.38
GPHN-215ENST00000557654 RHOBTB2Q9BYZ6 727 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 UNKLQ9H9P5 680 aaKnown RBP6.46□□□□□ -1.38
GPHN-215ENST00000557654 GALNT9Q9HCQ5 603 aa6.46□□□□□ -1.38
GPHN-215ENST00000557654 EPN1Q9Y6I3 576 aaPredicted RBP6.46□□□□□ -1.38
GPHN-215ENST00000557654 POLR2AP24928 1970 aaKnown RBP6.46□□□□□ -1.38
GPHN-215ENST00000557654 E9PLN8 166 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 DTNBO60941 627 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 SMARCA1P28370 1054 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 RAB27AP51159 221 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 PSMC1P62191 440 aaKnown RBP6.45□□□□□ -1.38
GPHN-215ENST00000557654 PIN1Q13526 163 aaPredicted RBP6.45□□□□□ -1.38
GPHN-215ENST00000557654 ZNF267Q14586 743 aaPredicted RBP6.45□□□□□ -1.38
GPHN-215ENST00000557654 PGS1Q32NB8 556 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 ABHD17BQ5VST6 288 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 HEATR3Q7Z4Q2 680 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 FAM43AQ8N2R8 423 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 SH2D3CQ8N5H7 860 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 SUPT20HQ8NEM7 779 aa6.45□□□□□ -1.38
GPHN-215ENST00000557654 LINC00476Q8WZB0 136 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms