RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 C15orf39Q6ZRI6 1047 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 C1orf127Q8N9H9 656 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 CCDC150Q8NCX0 1101 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 FAM200AQ8TCP9 573 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 SLC35C1Q96A29 364 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 C18orf25Q96B23 403 aaPredicted RBP15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 CNOT6LQ96LI5 555 aaKnown RBP15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 OXCT2Q9BYC2 517 aaPredicted RBP15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 IMPG2Q9BZV3 1241 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 MTMR12Q9C0I1 747 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 GZF1Q9H116 711 aaPredicted RBP15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 CXCL16Q9H2A7 254 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 TUBGCP4Q9UGJ1 667 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 DSEQ9UL01 958 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 NUB1Q9Y5A7 615 aa15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.22■□□□□ 0.03
SUPT16H-208ENST00000557652 GTPBP10A4D1E9 387 aaKnown RBP15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 B4GALT3O60512 393 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 PHACTR2O75167 634 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 EFEMP2O95967 443 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 MXI1P50539 228 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 WNT7BP56706 349 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 MAN2A1Q16706 1144 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 TCERG1LQ5VWI1 586 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 FUT10Q6P4F1 479 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 SV2AQ7L0J3 742 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 DPH6Q7L8W6 267 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 RNF168Q8IYW5 571 aaPredicted RBP15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 KLHL23Q8NBE8 558 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 OR5B17Q8NGF7 314 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 PLEKHO2Q8TD55 490 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 SUSD3Q96L08 255 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 C17orf80Q9BSJ5 609 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 TSPY26PQ9H489 355 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 NGRNQ9NPE2 291 aaKnown RBP15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 MARCH5Q9NX47 278 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 GDAP2Q9NXN4 497 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 PRG3Q9Y2Y8 225 aaPredicted RBP15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 COQ4Q9Y3A0 265 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 IRAK3Q9Y616 596 aa15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 COL4A4P53420 1690 aaPredicted RBP15.21■□□□□ 0.03
SUPT16H-208ENST00000557652 MTCL1Q9Y4B5 1905 aaKnown RBP15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 M0QZQ0 153 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 KIF4AO95239 1232 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 C1RP00736 705 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 SOD2P04179 222 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 ITGB3P05106 788 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 ITGB1P05556 798 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 P4HA1P13674 534 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 POU3F3P20264 500 aaPredicted RBP15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 MTIF2P46199 727 aaKnown RBP15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 LILRA4P59901 499 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 BIRC3Q13489 604 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 GPM6BQ13491 265 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 NCAPHQ15003 741 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 SGSM1Q2NKQ1 1148 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 USP41Q3LFD5 358 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 TCP11X2Q5H9J9 407 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 DCAF17Q5H9S7 520 aaPredicted RBP15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 C1orf220Q5T0J3 134 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 IRF2BP1Q8IU81 584 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 FBXL13Q8NEE6 735 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 APPL2Q8NEU8 664 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 CXorf38Q8TB03 319 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 SPPL3Q8TCT6 385 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 ZNF516Q92618 1163 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 PPP2R3CQ969Q6 453 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 EEF2KMTQ96G04 330 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 HERC2P3Q9BVR0 1158 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 GOLGA2P5Q9HBQ8 144 aa15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.2■□□□□ 0.02
SUPT16H-208ENST00000557652 PTPRJQ12913 1337 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 LAMA3Q16787 3333 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 LRRC10BA6NIK2 292 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 KCNJ18B7U540 433 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 GOLGA6L19H0YKK7 550 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 ARHGEF15O94989 841 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 AFPP02771 609 aaKnown RBP15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 ZNF18P17022 549 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 TYMPP19971 482 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 POLR2BP30876 1174 aaKnown RBP15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 FMO5P49326 533 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 DLG4P78352 724 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 KCNH2Q12809 1159 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 NCOA4Q13772 614 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 KCNJ12Q14500 433 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 IQCB1Q15051 598 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 TDRD10Q5VZ19 366 aaKnown RBP15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 TMEM86AQ8N2M4 240 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 TTC39CQ8N584 583 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 AOPEPQ8N6M6 819 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 ARNTL2Q8WYA1 636 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 FAM81BQ96LP2 452 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 POP1Q99575 1024 aaKnown RBP15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 TLR9Q9NR96 1032 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 HCSTQ9UBK5 93 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 SIX4Q9UIU6 781 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 AGAP1Q9UPQ3 857 aa15.19■□□□□ 0.02
SUPT16H-208ENST00000557652 ATG2AQ2TAZ0 1938 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms