RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 LLGL2Q6P1M3 1020 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 ELMSAN1Q6PJG2 1045 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 CRELD2Q6UXH1 353 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-211ENST00000557623 HS2ST1Q7LGA3 356 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 CEP57Q86XR8 500 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 FMR1NBQ8N0W7 255 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-211ENST00000557623 GPD1LQ8N335 351 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 GLIS3Q8NEA6 775 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 VN1R2Q8NFZ6 395 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 SCFD1Q8WVM8 642 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 RIN2Q8WYP3 895 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-211ENST00000557623 MSLNLQ96KJ4 702 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 CBWD1Q9BRT8 395 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 FAM213AQ9BRX8 229 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 KIAA1586Q9HCI6 787 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 DZANK1Q9NVP4 752 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 FNIP2Q9P278 1114 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 DPP7Q9UHL4 492 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 HOOK1Q9UJC3 728 aaKnown RBP13.56□□□□□ -0.24
SLIRP-211ENST00000557623 BARX2Q9UMQ3 279 aaPredicted RBP13.56□□□□□ -0.24
SLIRP-211ENST00000557623 C2CD2Q9Y426 696 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 NUB1Q9Y5A7 615 aa13.56□□□□□ -0.24
SLIRP-211ENST00000557623 GRXCR2A6NFK2 248 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 KIF20AO95235 890 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 FGFR3P22607 806 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 PAX3P23760 479 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 FAM160A1Q05DH4 1040 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 SPAG1Q07617 926 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 DPYDQ12882 1025 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 KNOP1Q1ED39 458 aaKnown RBP13.55□□□□□ -0.24
SLIRP-211ENST00000557623 SPATA1Q5VX52 437 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 JADE1Q6IE81 842 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 ANKRD54Q6NXT1 300 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 C3orf58Q8NDZ4 430 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 SLC22A17Q8WUG5 538 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 PIK3R5Q8WYR1 880 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 SAAL1Q96ER3 474 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 TIGD1Q96MW7 591 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 PCIF1Q9H4Z3 704 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 TUBGCP4Q9UGJ1 667 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 PRUNE2Q8WUY3 3088 aa13.55□□□□□ -0.24
SLIRP-211ENST00000557623 ZNF233A6NK53 670 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 SYN3O14994 580 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 TEX28O15482 410 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 TGFB1I1O43294 461 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 MBTPS2O43462 519 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 RHOBTB3O94955 611 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 GLUD1P00367 558 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 MCM4P33991 863 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 HOXD13P35453 343 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 BRCC3P46736 316 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 CLCN4P51793 760 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 RBM10P98175 930 aaKnown RBP13.54□□□□□ -0.24
SLIRP-211ENST00000557623 STK4Q13043 487 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 KCNB1Q14721 858 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 SURF1Q15526 300 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 CLUL1Q15846 466 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 PSMD5Q16401 504 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 RTP2Q5QGT7 225 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 CD300LGQ6UXG3 332 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 ANKS3Q6ZW76 656 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 BRSK2Q8IWQ3 736 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 SMRP1Q8NCR6 262 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 ENGASEQ8NFI3 743 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 GOLGA5Q8TBA6 731 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 ADAMTS19Q8TE59 1207 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 NOC3LQ8WTT2 800 aaKnown RBP13.54□□□□□ -0.24
SLIRP-211ENST00000557623 CACTINQ8WUQ7 758 aaKnown RBP13.54□□□□□ -0.24
SLIRP-211ENST00000557623 B3GALT6Q96L58 329 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 AGPAT3Q9NRZ7 376 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 RBAKQ9NYW8 714 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-211ENST00000557623 HSPBP1Q9NZL4 362 aa13.54□□□□□ -0.24
SLIRP-211ENST00000557623 ARIH1Q9Y4X5 557 aaPredicted RBP13.54□□□□□ -0.24
SLIRP-211ENST00000557623 SCN1AP35498 2009 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 GOLGA8IPA6NC78 632 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 GOLGA8JA6NMD2 632 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 NFICP08651 508 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 IL9P15248 144 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 EPCAMP16422 314 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 ITIH3Q06033 890 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 SNW1Q13573 536 aaKnown RBP13.53□□□□□ -0.24
SLIRP-211ENST00000557623 SMAD2Q15796 467 aaKnown RBP13.53□□□□□ -0.24
SLIRP-211ENST00000557623 CES5AQ6NT32 575 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 PRSS55Q6UWB4 352 aaPredicted RBP13.53□□□□□ -0.24
SLIRP-211ENST00000557623 C12orf56Q8IXR9 622 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 ZNF687Q8N1G0 1237 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 KIAA0895Q8NCT3 520 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 APPL2Q8NEU8 664 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 LNX1Q8TBB1 728 aaPredicted RBP13.53□□□□□ -0.24
SLIRP-211ENST00000557623 HDAC7Q8WUI4 952 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 SUSD3Q96L08 255 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 FBXL18Q96ME1 805 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 UHRF1Q96T88 793 aaPredicted RBP13.53□□□□□ -0.24
SLIRP-211ENST00000557623 COL25A1Q9BXS0 654 aaPredicted RBP13.53□□□□□ -0.24
SLIRP-211ENST00000557623 RMND1Q9NWS8 449 aa13.53□□□□□ -0.24
SLIRP-211ENST00000557623 ARHGEF37A1IGU5 675 aa13.52□□□□□ -0.25
SLIRP-211ENST00000557623 H7C4K7 107 aa13.52□□□□□ -0.25
SLIRP-211ENST00000557623 I3L4J1 428 aa13.52□□□□□ -0.25
SLIRP-211ENST00000557623 TULP1O00294 542 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms