RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 SOX5P35711 763 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 MAPK10P53779 464 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 TMPRSS15P98073 1019 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 FAPQ12884 760 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 STAT4Q14765 748 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 VWA1Q6PCB0 445 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 GRASPQ7Z6J2 395 aaPredicted RBP3.59□□□□□ -1.83
FOXN3-216ENST00000557496 DCBLD1Q8N8Z6 715 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 TBC1D15Q8TC07 691 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 SCARB1Q8WTV0 552 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 SMG7Q92540 1137 aaKnown RBP3.59□□□□□ -1.83
FOXN3-216ENST00000557496 C1QTNF7Q9BXJ2 289 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 MANSC1Q9H8J5 431 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 TBX22Q9Y458 520 aa3.59□□□□□ -1.83
FOXN3-216ENST00000557496 CCDC151A5D8V7 595 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 KIAA0391O15091 583 aaKnown RBP3.58□□□□□ -1.84
FOXN3-216ENST00000557496 PRKD3O94806 890 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 EYA4O95677 639 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 SLC6A4P31645 630 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 ABCG1P45844 678 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 NBPF8Q3BBV2 869 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 AKNAD1Q5T1N1 836 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.58□□□□□ -1.84
FOXN3-216ENST00000557496 MICALCLQ6ZW33 695 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 PTF1AQ7RTS3 328 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 NPM2Q86SE8 214 aaKnown RBP3.58□□□□□ -1.84
FOXN3-216ENST00000557496 PEG10Q86TG7 708 aaKnown RBP3.58□□□□□ -1.84
FOXN3-216ENST00000557496 TMEM125Q96AQ2 219 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 AHCYL2Q96HN2 611 aaKnown RBP3.58□□□□□ -1.84
FOXN3-216ENST00000557496 TLR10Q9BXR5 811 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 C11orf54Q9H0W9 315 aaPredicted RBP3.58□□□□□ -1.84
FOXN3-216ENST00000557496 INTS13Q9NVM9 706 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 VSX1Q9NZR4 365 aaPredicted RBP3.58□□□□□ -1.84
FOXN3-216ENST00000557496 DNM3Q9UQ16 869 aa3.58□□□□□ -1.84
FOXN3-216ENST00000557496 MYBBP1AQ9BQG0 1328 aaKnown RBP3.58□□□□□ -1.84
FOXN3-216ENST00000557496 ARHGEF17Q96PE2 2063 aaPredicted RBP3.58□□□□□ -1.84
FOXN3-216ENST00000557496 PRAMEF33A0A0G2JMD5 474 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 ORC4O43929 436 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 PRAMEF10O60809 474 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 ELFN1P0C7U0 828 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 KCNA2P16389 499 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 GPD1P21695 349 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 GRIA3P42263 894 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 CTXN1P60606 82 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 ERVK-21P61565 698 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 CREMQ03060 361 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 SRSF4Q08170 494 aaKnown RBP3.57□□□□□ -1.84
FOXN3-216ENST00000557496 ATP2B3Q16720 1220 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 KAZNQ674X7 775 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 LHFPL2Q6ZUX7 228 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 NLGN4YQ8NFZ3 816 aaPredicted RBP3.57□□□□□ -1.84
FOXN3-216ENST00000557496 CHAC2Q8WUX2 184 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 ZNF778Q96MU6 729 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 CPNE5Q9HCH3 593 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 ZNF277Q9NRM2 450 aaPredicted RBP3.57□□□□□ -1.84
FOXN3-216ENST00000557496 CTTNBP2NLQ9P2B4 639 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 GPR45Q9Y5Y3 372 aa3.57□□□□□ -1.84
FOXN3-216ENST00000557496 GPR39O43194 453 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 AGXTP21549 392 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 GATA3P23771 443 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 ITPKBP27987 946 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 WASP42768 502 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 ZNF81P51508 661 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 RPS7P62081 194 aaKnown RBP3.56□□□□□ -1.84
FOXN3-216ENST00000557496 LCE1AQ5T7P2 110 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 TSTD2Q5T7W7 516 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 CLNKQ7Z7G1 428 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 NOP9Q86U38 636 aaKnown RBP3.56□□□□□ -1.84
FOXN3-216ENST00000557496 SLC30A5Q8TAD4 765 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 HASPINQ8TF76 798 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 TFAP2BQ92481 460 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 LPIN2Q92539 896 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 DPF1Q92782 380 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 DPF2Q92785 391 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 FBXL20Q96IG2 436 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 C7orf25Q9BPX7 421 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 SLC29A3Q9BZD2 475 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 ZNF70Q9UC06 446 aaPredicted RBP3.56□□□□□ -1.84
FOXN3-216ENST00000557496 CDYLQ9Y232 598 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 NEU2Q9Y3R4 380 aa3.56□□□□□ -1.84
FOXN3-216ENST00000557496 MANSC4A6NHS7 340 aaPredicted RBP3.55□□□□□ -1.84
FOXN3-216ENST00000557496 ADM5C9JUS6 153 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 K7ESF4 209 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 AGFG2O95081 481 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 CELA2AP08217 269 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 SBK3P0C264 359 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 SOX10P56693 466 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 KRTAP10-9P60411 292 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 PTPRRQ15256 657 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 TXNRD1Q16881 649 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 BHLHA9Q7RTU4 235 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 TMPRSS9Q7Z410 1059 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 SPATS2Q86XZ4 545 aaKnown RBP3.55□□□□□ -1.84
FOXN3-216ENST00000557496 RHOT1Q8IXI2 618 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 MYCBPAPQ8TBZ2 947 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 NRG4Q8WWG1 115 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 PGBD1Q96JS3 809 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 SLC2A13Q96QE2 648 aa3.55□□□□□ -1.84
FOXN3-216ENST00000557496 WDR27A2RRH5 827 aa3.54□□□□□ -1.84
FOXN3-216ENST00000557496 LINC00473A8K010 186 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms