RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 BACE2Q9Y5Z0 518 aa17.98■□□□□ 0.47
VSX1-207ENST00000557285 PPEF2O14830 753 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 POLR2DO15514 142 aaKnown RBP17.97■□□□□ 0.47
VSX1-207ENST00000557285 XPOTO43592 962 aaKnown RBP17.97■□□□□ 0.47
VSX1-207ENST00000557285 N4BP1O75113 896 aaKnown RBP17.97■□□□□ 0.47
VSX1-207ENST00000557285 PPP1R37O75864 691 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 PRPF6O94906 941 aaKnown RBP17.97■□□□□ 0.47
VSX1-207ENST00000557285 SIGLEC14Q08ET2 396 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 TMEM132DQ14C87 1099 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 E2F4Q16254 413 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 DSTYKQ6XUX3 929 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 IQUBQ8NA54 791 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 BEST2Q8NFU1 509 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 SUSD3Q96L08 255 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 MYADMQ96S97 322 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 FAM213AQ9BRX8 229 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 TNMDQ9H2S6 317 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 CFAP45Q9UL16 551 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 SORCS3Q9UPU3 1222 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 PCDHB13Q9Y5F0 798 aa17.97■□□□□ 0.47
VSX1-207ENST00000557285 H7C4K7 107 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 PRRG1O14668 218 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 SYN3O14994 580 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 C1RP00736 705 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 CASP1P29466 404 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 ADSSP30520 456 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 LRPAP1P30533 357 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 ROR1Q01973 937 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 ZBTB6Q15916 424 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 CYP26C1Q6V0L0 522 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 GLIS3Q8NEA6 775 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 ZSWIM2Q8NEG5 633 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 STRA6Q9BX79 667 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 PCIF1Q9H4Z3 704 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 HCFC1R1Q9NWW0 138 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 FAM13BQ9NYF5 915 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 FBXL5Q9UKA1 691 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 PCDHB8Q9UN66 801 aa17.96■□□□□ 0.47
VSX1-207ENST00000557285 FRMD3A2A2Y4 597 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 WDR27A2RRH5 827 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 GOLGA8IPA6NC78 632 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 GOLGA8JA6NMD2 632 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 XYLBO75191 536 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 FSHRP23945 695 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 ELF1P32519 619 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 SPATA1Q5VX52 437 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 ZNF280DQ6N043 979 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 APPL2Q8NEU8 664 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 RSAD2Q8WXG1 361 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 TRIM9Q9C026 710 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 LRRC27Q9C0I9 530 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 BLZF1Q9H2G9 400 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 CUEDC2Q9H467 287 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 CYP4F11Q9HBI6 524 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 OLFML3Q9NRN5 406 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 KBTBD4Q9NVX7 518 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 STYXL1Q9Y6J8 313 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 DOCK8Q8NF50 2099 aa17.95■□□□□ 0.46
VSX1-207ENST00000557285 HNRNPA1P09651 372 aaKnown RBP eCLIP17.94■□□□□ 0.46
VSX1-207ENST00000557285 CPB1P15086 417 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 CYP3A5P20815 502 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 AFMP43652 599 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 AMPD3Q01432 767 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 YWHAHQ04917 246 aaPredicted RBP17.94■□□□□ 0.46
VSX1-207ENST00000557285 POSTNQ15063 836 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 CRELD2Q6UXH1 353 aaPredicted RBP17.94■□□□□ 0.46
VSX1-207ENST00000557285 USP37Q86T82 979 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 SUGP1Q8IWZ8 645 aaKnown RBP17.94■□□□□ 0.46
VSX1-207ENST00000557285 CD302Q8IX05 232 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 GRAMD1CQ8IYS0 662 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 ASIC4Q96FT7 647 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 MFSD14AQ96MC6 490 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 CBWD1Q9BRT8 395 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 KCNK12Q9HB15 430 aa17.94■□□□□ 0.46
VSX1-207ENST00000557285 WDFY4Q6ZS81 3184 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 SCN1AP35498 2009 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 PDGFBP01127 241 aaPredicted RBP17.93■□□□□ 0.46
VSX1-207ENST00000557285 ADRB2P07550 413 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 OR4Q2P0C623 313 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 CDR1P51861 262 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 ALCAMQ13740 583 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 MRPL58Q14197 206 aaKnown RBP17.93■□□□□ 0.46
VSX1-207ENST00000557285 C9orf57Q5W0N0 161 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 RESP18Q5W5W9 173 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 ATL3Q6DD88 541 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 SLC8B1Q6J4K2 584 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 ARMCX5Q6P1M9 558 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 EFCAB13Q8IY85 973 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 UBALD2Q8IYN6 164 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 ZNF461Q8TAF7 563 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 ING5Q8WYH8 240 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 FAM84AQ96KN4 292 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 RHOBTB2Q9BYZ6 727 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 ZDHHC9Q9Y397 364 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 TCHHQ07283 1943 aa17.93■□□□□ 0.46
VSX1-207ENST00000557285 M0QZQ0 153 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 SPTLC1O15269 473 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 TBC1D4O60343 1298 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 SEC24AO95486 1093 aa17.92■□□□□ 0.46
VSX1-207ENST00000557285 LRG1P02750 347 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms