RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 B4GALT3O60512 393 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 TADA2AO75478 443 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 ITGB1P05556 798 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 TPM2P07951 284 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 CASP4P49662 377 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 DUOXA2Q1HG44 320 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 FILIP1LQ4L180 1135 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 CEP135Q66GS9 1140 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 INTS8Q75QN2 995 aaKnown RBP17.73■□□□□ 0.43
PCNX4-213ENST00000556907 FAM186BQ8IYM0 893 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 ZSWIM2Q8NEG5 633 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 TMC2Q8TDI7 906 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 MTMR10Q9NXD2 777 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 ADAM28Q9UKQ2 775 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 SSX2IPQ9Y2D8 614 aa17.73■□□□□ 0.43
PCNX4-213ENST00000556907 NT5C1B-RDH14C9J2C7 533 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 B3GAT3O94766 335 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 NFICP08651 508 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 KRT13P13646 458 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 CLCNKBP51801 687 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 MCCD1P59942 119 aaPredicted RBP17.72■□□□□ 0.43
PCNX4-213ENST00000556907 CLDN10P78369 228 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 MIIPQ5JXC2 388 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 SPRED2Q7Z698 418 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 GPR65Q8IYL9 337 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 POF1BQ8WVV4 589 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 C18orf25Q96B23 403 aaPredicted RBP17.72■□□□□ 0.43
PCNX4-213ENST00000556907 MRPL38Q96DV4 380 aaKnown RBP17.72■□□□□ 0.43
PCNX4-213ENST00000556907 BORCS6Q96GS4 357 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 ANKRD36BP1Q96IX9 119 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 NAP1L5Q96NT1 182 aaPredicted RBP17.72■□□□□ 0.43
PCNX4-213ENST00000556907 PPP1R9BQ96SB3 815 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 PRDM12Q9H4Q4 367 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 PDE11AQ9HCR9 933 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 NGRNQ9NPE2 291 aaKnown RBP17.72■□□□□ 0.43
PCNX4-213ENST00000556907 RTN4Q9NQC3 1192 aaKnown RBP17.72■□□□□ 0.43
PCNX4-213ENST00000556907 DPP3Q9NY33 737 aa17.72■□□□□ 0.43
PCNX4-213ENST00000556907 ARMCX3Q9UH62 379 aaPredicted RBP17.72■□□□□ 0.43
PCNX4-213ENST00000556907 PRG3Q9Y2Y8 225 aaPredicted RBP17.72■□□□□ 0.43
PCNX4-213ENST00000556907 SF3B1O75533 1304 aaKnown RBP eCLIP17.72■□□□□ 0.43
PCNX4-213ENST00000556907 EPOPA6NHQ4 379 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 PODXLO00592 558 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 LPXNO60711 386 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 TNNC2P02585 160 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 TMEM191BP0C7N4 346 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 PRKCSHP14314 528 aaPredicted RBP17.71■□□□□ 0.43
PCNX4-213ENST00000556907 PBX3P40426 434 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 TFAMQ00059 246 aaKnown RBP17.71■□□□□ 0.43
PCNX4-213ENST00000556907 SOX4Q06945 474 aaPredicted RBP17.71■□□□□ 0.43
PCNX4-213ENST00000556907 EFCAB13Q8IY85 973 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 PARD3BQ8TEW8 1205 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 CGRRF1Q99675 332 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 ALG13Q9NP73 1137 aaKnown RBP17.71■□□□□ 0.43
PCNX4-213ENST00000556907 TLR9Q9NR96 1032 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 MARCH5Q9NX47 278 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 ITGA11Q9UKX5 1188 aa17.71■□□□□ 0.43
PCNX4-213ENST00000556907 R3HCC1Q9Y3T6 440 aaKnown RBP17.71■□□□□ 0.43
PCNX4-213ENST00000556907 ANO9A1A5B4 782 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 ARHGEF37A1IGU5 675 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 GRM6O15303 877 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 EFEMP2O95967 443 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 SOD2P04179 222 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 TNNI1P19237 187 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 PBX1P40424 430 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 PNPLA4P41247 253 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 NR1I3Q14994 352 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 Q7L0L9 218 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 RNF168Q8IYW5 571 aaPredicted RBP17.7■□□□□ 0.42
PCNX4-213ENST00000556907 GDPD5Q8WTR4 605 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 PPP2R3CQ969Q6 453 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 CCDC127Q96BQ5 260 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 FAM161BQ96MY7 647 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 CDX2Q99626 313 aaPredicted RBP17.7■□□□□ 0.42
PCNX4-213ENST00000556907 PAAF1Q9BRP4 392 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 VPS16Q9H269 839 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 GOLGA2P5Q9HBQ8 144 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 TUBGCP4Q9UGJ1 667 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 NUB1Q9Y5A7 615 aa17.7■□□□□ 0.42
PCNX4-213ENST00000556907 CHD7Q9P2D1 2997 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 PIRO00625 290 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 STX10O60499 249 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 KIF4AO95239 1232 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 DLATP10515 647 aaKnown RBP17.69■□□□□ 0.42
PCNX4-213ENST00000556907 VAMP7P51809 220 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 RBP5P82980 135 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 BFSP1Q12934 665 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 USP41Q3LFD5 358 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 VWA3BQ502W6 1294 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 TIGD5Q53EQ6 642 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 C9orf57Q5W0N0 161 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 FUT10Q6P4F1 479 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 PDXDC1Q6P996 788 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 TMEM173Q86WV6 379 aaPredicted RBP17.69■□□□□ 0.42
PCNX4-213ENST00000556907 VSTM4Q8IW00 320 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 LRRC52Q8N7C0 313 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 ZNF560Q96MR9 790 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 HERC2P3Q9BVR0 1158 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.69■□□□□ 0.42
PCNX4-213ENST00000556907 IRAK3Q9Y616 596 aa17.69■□□□□ 0.42
PCNX4-213ENST00000556907 ITIH6Q6UXX5 1313 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms