RNA–Protein interactions for RNA: ENST00000556814.5

FCF1-208, Transcript of FCF1, rRNA-processing protein, humanhuman

TSL 4

Gene FCF1, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCF1-208ENST00000556814 SLC35A4Q96G79 324 aa5.29□□□□□ -1.56
FCF1-208ENST00000556814 TMEM60Q9H2L4 133 aa5.29□□□□□ -1.56
FCF1-208ENST00000556814 RLIMQ9NVW2 624 aa5.29□□□□□ -1.56
FCF1-208ENST00000556814 CFAP97Q9P2B7 532 aa5.29□□□□□ -1.56
FCF1-208ENST00000556814 GABBR1Q9UBS5 961 aa5.29□□□□□ -1.56
FCF1-208ENST00000556814 A0A088AWK7 358 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 GAGE12BA1L429 117 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 GAGE12HA6NDE8 117 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 PPFIA4O75335 1185 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 TUSC2O75896 110 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 PEX11BO96011 259 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 CKBP12277 381 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 TACR2P21452 398 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 GCSHP23434 173 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 PRDX5P30044 214 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 PIK3CGP48736 1102 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 NKX6-1P78426 367 aaPredicted RBP5.28□□□□□ -1.56
FCF1-208ENST00000556814 GPSM2P81274 684 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 MXRA7P84157 204 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 TOB2Q14106 344 aaPredicted RBP5.28□□□□□ -1.56
FCF1-208ENST00000556814 FGL2Q14314 439 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 HLTFQ14527 1009 aaKnown RBP eCLIP5.28□□□□□ -1.56
FCF1-208ENST00000556814 GBX1Q14549 363 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 ANO6Q4KMQ2 910 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 CCDC93Q567U6 631 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 FAM102AQ5T9C2 384 aaPredicted RBP5.28□□□□□ -1.56
FCF1-208ENST00000556814 AGAP9Q5VTM2 703 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 GDF7Q7Z4P5 450 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 SRGAP1Q7Z6B7 1085 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 PDSS2Q86YH6 399 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 SYT12Q8IV01 421 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 SH2D3CQ8N5H7 860 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 NUP133Q8WUM0 1156 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 SLC46A2Q9BY10 475 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 BRD9Q9H8M2 597 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 SARS2Q9NP81 518 aaKnown RBP5.28□□□□□ -1.56
FCF1-208ENST00000556814 CNNM1Q9NRU3 951 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 OBP2AQ9NY56 170 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 ZDHHC8Q9ULC8 765 aa5.28□□□□□ -1.56
FCF1-208ENST00000556814 CDHR4A6H8M9 788 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 GRXCR1A8MXD5 290 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 LEFTY2O00292 366 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 HLA-DOAP06340 250 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 SBK3P0C264 359 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 GDF5P43026 501 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 AGFG1P52594 562 aaKnown RBP5.27□□□□□ -1.57
FCF1-208ENST00000556814 RNASE9P60153 205 aaKnown RBP5.27□□□□□ -1.57
FCF1-208ENST00000556814 RAB1AP62820 205 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 PLS1Q14651 629 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 UTP14CQ5TAP6 766 aaKnown RBP5.27□□□□□ -1.57
FCF1-208ENST00000556814 TSHZ3Q63HK5 1081 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 OVCH2Q7RTZ1 564 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 DGKHQ86XP1 1220 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 FAM90A1Q86YD7 464 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 PPP1R35Q8TAP8 253 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 TBC1D15Q8TC07 691 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 SH3RF3Q8TEJ3 882 aaPredicted RBP5.27□□□□□ -1.57
FCF1-208ENST00000556814 SIK2Q9H0K1 926 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 MRPL46Q9H2W6 279 aaKnown RBP5.27□□□□□ -1.57
FCF1-208ENST00000556814 RNPEPQ9H4A4 650 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 TRPM5Q9NZQ8 1165 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 CEP72Q9P209 647 aa5.27□□□□□ -1.57
FCF1-208ENST00000556814 ING1Q9UK53 422 aaPredicted RBP5.27□□□□□ -1.57
FCF1-208ENST00000556814 USP15Q9Y4E8 981 aaPredicted RBP5.27□□□□□ -1.57
FCF1-208ENST00000556814 RNASET2O00584 256 aaKnown RBP5.26□□□□□ -1.57
FCF1-208ENST00000556814 AGFG2O95081 481 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 GNAI2P04899 355 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 SLC6A2P23975 617 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 SLC6A4P31645 630 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 PPP4R4Q6NUP7 873 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 ARMC6Q6NXE6 501 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 FOXR2Q6PJQ5 311 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 NPNTQ6UXI9 565 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 CHST15Q7LFX5 561 aaPredicted RBP5.26□□□□□ -1.57
FCF1-208ENST00000556814 OR56A1Q8NGH5 318 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 TNPO1Q92973 898 aaKnown RBP5.26□□□□□ -1.57
FCF1-208ENST00000556814 SCAMP4Q969E2 229 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 TTC17Q96AE7 1141 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 PLEKHG4BQ96PX9 1271 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 PNKPQ96T60 521 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 LRFN3Q9BTN0 628 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 CHST2Q9Y4C5 530 aa5.26□□□□□ -1.57
FCF1-208ENST00000556814 FRMPD2Q68DX3 1309 aaPredicted RBP5.25□□□□□ -1.57
FCF1-208ENST00000556814 CAPN8A6NHC0 703 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 PLSCR1O15162 318 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 FAM20BO75063 409 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 RPS6KA4O75676 772 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 CHEK2O96017 543 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 HRGP04196 525 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 CACNB3P54284 484 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 FOXE3Q13461 319 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 KIF22Q14807 665 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 KHDC1LQ5JSQ8 128 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 EMC10Q5UCC4 262 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 METRNLQ641Q3 311 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 ZNF276Q8N554 614 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 SLC25A43Q8WUT9 341 aaPredicted RBP5.25□□□□□ -1.57
FCF1-208ENST00000556814 DDX17Q92841 729 aaKnown RBP5.25□□□□□ -1.57
FCF1-208ENST00000556814 MED15Q96RN5 788 aa5.25□□□□□ -1.57
FCF1-208ENST00000556814 C1orf43Q9BWL3 253 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms