RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 TUBD1Q9UJT1 453 aa8.69□□□□□ -1.02
PSEN1-215ENST00000556011 ZNF215Q9UL58 517 aaPredicted RBP8.69□□□□□ -1.02
PSEN1-215ENST00000556011 PRSS44E7EML9 344 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 MT-CO3P00414 261 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 FOSL1P15407 271 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 PCSK6P29122 969 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 PTGER4P35408 488 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 CLCN1P35523 988 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 NOP2P46087 812 aaKnown RBP8.68□□□□□ -1.02
PSEN1-215ENST00000556011 RFX5P48382 616 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-215ENST00000556011 DUSP3P51452 185 aaPredicted RBP8.68□□□□□ -1.02
PSEN1-215ENST00000556011 ST3GAL1Q11201 340 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 KLRB1Q12918 225 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 BYSLQ13895 437 aaKnown RBP8.68□□□□□ -1.02
PSEN1-215ENST00000556011 BIVMQ86UB2 503 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 FAM228AQ86W67 206 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 CCDC82Q8N4S0 544 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 TSPYL6Q8N831 410 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 STAG1Q8WVM7 1258 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 RFFLQ8WZ73 363 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 HVCN1Q96D96 273 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 CNDP2Q96KP4 475 aaKnown RBP8.68□□□□□ -1.02
PSEN1-215ENST00000556011 LRRC3BQ96PB8 259 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 CLIP2Q9UDT6 1046 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 PCDHGB6Q9Y5F9 930 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 PCDHGA4Q9Y5G9 962 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 CCDC171Q6TFL3 1326 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 KIF26BQ2KJY2 2108 aa8.68□□□□□ -1.02
PSEN1-215ENST00000556011 NOP56O00567 594 aaKnown RBP8.67□□□□□ -1.02
PSEN1-215ENST00000556011 LDOC1O95751 146 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-215ENST00000556011 RPLP2P05387 115 aaKnown RBP8.67□□□□□ -1.02
PSEN1-215ENST00000556011 POU2F2P09086 479 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 IFIT2P09913 472 aaKnown RBP8.67□□□□□ -1.02
PSEN1-215ENST00000556011 CAPN3P20807 821 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 DRD1P21728 446 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 UBA1P22314 1058 aaKnown RBP8.67□□□□□ -1.02
PSEN1-215ENST00000556011 CCR2P41597 374 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 GALK1P51570 392 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 ITPRIPL2Q3MIP1 535 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 IL27RAQ6UWB1 636 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 TMEM92Q6UXU6 159 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 FAM160B2Q86V87 743 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 HDAC11Q96DB2 347 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 AVENQ9NQS1 362 aaPredicted RBP8.67□□□□□ -1.02
PSEN1-215ENST00000556011 PRDM8Q9NQV8 689 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 NYAP2Q9P242 653 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 FNIP2Q9P278 1114 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 BCCIPQ9P287 314 aaKnown RBP eCLIP8.67□□□□□ -1.02
PSEN1-215ENST00000556011 SLC5A6Q9Y289 635 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 INPP5FQ9Y2H2 1132 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 FAN1Q9Y2M0 1017 aa8.67□□□□□ -1.02
PSEN1-215ENST00000556011 BAZ2AQ9UIF9 1905 aaKnown RBP8.66□□□□□ -1.02
PSEN1-215ENST00000556011 ZNF106Q9H2Y7 1883 aaKnown RBP8.66□□□□□ -1.02
PSEN1-215ENST00000556011 ABCB11O95342 1321 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 CNTNAP2Q9UHC6 1331 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 A0A1B0GTW7 788 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 ANTXRLA6NF34 631 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 NRP1O14786 923 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 EIF3JO75822 258 aaKnown RBP8.66□□□□□ -1.02
PSEN1-215ENST00000556011 ALDH1A2O94788 518 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 RBMS1P29558 406 aaKnown RBP8.66□□□□□ -1.02
PSEN1-215ENST00000556011 YBX1P67809 324 aaKnown RBP8.66□□□□□ -1.02
PSEN1-215ENST00000556011 MVPQ14764 893 aaKnown RBP8.66□□□□□ -1.02
PSEN1-215ENST00000556011 TGIF1Q15583 401 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 CRY1Q16526 586 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 LONRF3Q496Y0 759 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 FBXO43Q4G163 708 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 ODR4Q5SWX8 454 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 SLFN13Q68D06 897 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 BORAQ6PGQ7 559 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 SLC36A4Q6YBV0 504 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 RNF168Q8IYW5 571 aaPredicted RBP8.66□□□□□ -1.02
PSEN1-215ENST00000556011 ZCCHC9Q8N567 271 aaKnown RBP8.66□□□□□ -1.02
PSEN1-215ENST00000556011 CCDC33Q8N5R6 958 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 TAAR1Q96RJ0 339 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 TRIM8Q9BZR9 551 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 TRIM35Q9UPQ4 493 aa8.66□□□□□ -1.02
PSEN1-215ENST00000556011 MEIS1O00470 390 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 KCNK3O14649 394 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 DDHD2O94830 711 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 EFEMP2O95967 443 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 ALDH2P05091 517 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 MCM2P49736 904 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 IL9RQ01113 521 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 HAUS6Q7Z4H7 955 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
PSEN1-215ENST00000556011 CENPTQ96BT3 561 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 TMEM87BQ96K49 555 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 SLC46A1Q96NT5 459 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 PDCD2LQ9BRP1 358 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 CHMP4AQ9BY43 222 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.65□□□□□ -1.02
PSEN1-215ENST00000556011 CHST7Q9NS84 486 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 MARCH5Q9NX47 278 aa8.65□□□□□ -1.02
PSEN1-215ENST00000556011 EVPLQ92817 2033 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 PTPN2P17706 415 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 WT1P19544 449 aaPredicted RBP8.64□□□□□ -1.03
PSEN1-215ENST00000556011 C14orf28Q4W4Y0 310 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 ARHGAP29Q52LW3 1261 aa8.64□□□□□ -1.03
PSEN1-215ENST00000556011 NOMO2Q5JPE7 1267 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms