RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 RAB33AQ14088 237 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 UVSSAQ2YD98 709 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 PABPC1LQ4VXU2 614 aaKnown RBP11.86□□□□□ -0.51
TDP1-212ENST00000555565 GLRA4Q5JXX5 417 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 LIN9Q5TKA1 542 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 C1orf186Q6ZWK4 172 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 TAS1R3Q7RTX0 852 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 MAP4K3Q8IVH8 894 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 CEP120Q8N960 986 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 SLC7A14Q8TBB6 771 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 ING5Q8WYH8 240 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 DNASE1L2Q92874 299 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 ELSPBP1Q96BH3 223 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 MCRS1Q96EZ8 462 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 ACO2Q99798 780 aaKnown RBP11.86□□□□□ -0.51
TDP1-212ENST00000555565 TTPALQ9BTX7 342 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 LMAN1LQ9HAT1 526 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 AVENQ9NQS1 362 aaPredicted RBP11.86□□□□□ -0.51
TDP1-212ENST00000555565 ARHGAP28Q9P2N2 729 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 POLIQ9UNA4 740 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 MRPS17Q9Y2R5 130 aaKnown RBP11.86□□□□□ -0.51
TDP1-212ENST00000555565 CITO14578 2027 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 PHLPP2Q6ZVD8 1323 aa11.86□□□□□ -0.51
TDP1-212ENST00000555565 SFI1A8K8P3 1242 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 XYLBO75191 536 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 CHRNB1P11230 501 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 HOXC13P31276 330 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 LIMK1P53667 647 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 DMP1Q13316 513 aaPredicted RBP11.85□□□□□ -0.51
TDP1-212ENST00000555565 SIM2Q14190 667 aaPredicted RBP11.85□□□□□ -0.51
TDP1-212ENST00000555565 PSMD5Q16401 504 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 WDR44Q5JSH3 913 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 HYIQ5T013 277 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 FAM171A1Q5VUB5 890 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 PRR23BQ6ZRT6 265 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 CEP57Q86XR8 500 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 DRC1Q96MC2 740 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 PNMA5Q96PV4 448 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 PPP1R10Q96QC0 940 aaKnown RBP11.85□□□□□ -0.51
TDP1-212ENST00000555565 IER2Q9BTL4 223 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 TARS2Q9BW92 718 aaKnown RBP11.85□□□□□ -0.51
TDP1-212ENST00000555565 CDT1Q9H211 546 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 TMEM134Q9H6X4 195 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 PTPRHQ9HD43 1115 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 KMT5AQ9NQR1 393 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 RXFP3Q9NSD7 469 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 GDE1Q9NZC3 331 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
TDP1-212ENST00000555565 RAB23Q9ULC3 237 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 NDRG2Q9UN36 371 aaKnown RBP11.85□□□□□ -0.51
TDP1-212ENST00000555565 COL4A2P08572 1712 aa11.85□□□□□ -0.51
TDP1-212ENST00000555565 ZFYVE26Q68DK2 2539 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 SMIM28A0A1B0GU29 152 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 VWA3AA6NCI4 1184 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 TMEM189-UBE2V1I3L0A0 370 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 K7ESF4 209 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 MAN2B1O00754 1011 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 ABLIM1O14639 778 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 SLC16A4O15374 487 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 PROS1P07225 676 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 RHOP08100 348 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 GUCY2CP25092 1073 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 GRM5P41594 1212 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 CCR3P51677 355 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 ELAVL2Q12926 359 aaKnown RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 ZRSR1Q15695 479 aaKnown RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 ZNF568Q3ZCX4 644 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 XKR4Q5GH76 650 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 PRSS36Q5K4E3 855 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 CD300LGQ6UXG3 332 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 ALKAL1Q6UXT8 129 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 APBB1IPQ7Z5R6 666 aaPredicted RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 DDX1Q92499 740 aaKnown RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 PLIN2Q99541 437 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 NTPCRQ9BSD7 190 aaKnown RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 MRPL4Q9BYD3 311 aaKnown RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 C17orf75Q9HAS0 396 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 GOLGA2P5Q9HBQ8 144 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 ZNF334Q9HCZ1 680 aaPredicted RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 TRPV5Q9NQA5 729 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 C2orf42Q9NWW7 574 aa11.84□□□□□ -0.51
TDP1-212ENST00000555565 MRPS23Q9Y3D9 190 aaKnown RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 RBM19Q9Y4C8 960 aaKnown RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 FASNP49327 2511 aaKnown RBP11.84□□□□□ -0.51
TDP1-212ENST00000555565 CHURC1-FNTBB4DL54 471 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 H3BQV1 296 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 B3GAT3O94766 335 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 PAPSS2O95340 614 aaPredicted RBP11.83□□□□□ -0.52
TDP1-212ENST00000555565 CEBPBP17676 345 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 FGFR3P22607 806 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 PROZP22891 400 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 OR1D2P34982 312 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 CXCL12P48061 93 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 FNTBP49356 437 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 MCM2P49736 904 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 CLCNKBP51801 687 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 SLC12A3P55017 1021 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 OSTNP61366 133 aa11.83□□□□□ -0.52
TDP1-212ENST00000555565 SOX4Q06945 474 aaPredicted RBP11.83□□□□□ -0.52
TDP1-212ENST00000555565 RAD51AP2Q09MP3 1159 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms