RNA–Protein interactions for RNA: ENST00000555358.5

STRN3-207, Transcript of striatin 3, humanhuman

TSL 1 (best)

Gene STRN3, Length 2,208 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-207ENST00000555358 KAT5Q92993 513 aa25.31■■□□□ 1.64
STRN3-207ENST00000555358 HVCN1Q96D96 273 aa25.31■■□□□ 1.64
STRN3-207ENST00000555358 SPATA33Q96N06 139 aa25.31■■□□□ 1.64
STRN3-207ENST00000555358 NIFKQ9BYG3 293 aaKnown RBP25.31■■□□□ 1.64
STRN3-207ENST00000555358 TBX20Q9UMR3 447 aa25.31■■□□□ 1.64
STRN3-207ENST00000555358 TRPC6Q9Y210 931 aa25.31■■□□□ 1.64
STRN3-207ENST00000555358 TCRBV7S2A1N4TA0A589 114 aa25.3■■□□□ 1.64
STRN3-207ENST00000555358 NOP56O00567 594 aaKnown RBP25.3■■□□□ 1.64
STRN3-207ENST00000555358 MARK3P27448 753 aa25.3■■□□□ 1.64
STRN3-207ENST00000555358 FAM110CQ1W6H9 321 aa25.3■■□□□ 1.64
STRN3-207ENST00000555358 C6orf118Q5T5N4 469 aa25.3■■□□□ 1.64
STRN3-207ENST00000555358 SEL1L2Q5TEA6 688 aa25.3■■□□□ 1.64
STRN3-207ENST00000555358 FAM160B1Q5W0V3 765 aa25.3■■□□□ 1.64
STRN3-207ENST00000555358 JPH2Q9BR39 696 aaPredicted RBP25.3■■□□□ 1.64
STRN3-207ENST00000555358 NTPCRQ9BSD7 190 aaKnown RBP25.3■■□□□ 1.64
STRN3-207ENST00000555358 DHX33Q9H6R0 707 aaKnown RBP25.3■■□□□ 1.64
STRN3-207ENST00000555358 GEMIN8Q9NWZ8 242 aaKnown RBP25.3■■□□□ 1.64
STRN3-207ENST00000555358 MTRF1LQ9UGC7 380 aaKnown RBP25.3■■□□□ 1.64
STRN3-207ENST00000555358 CPA4Q9UI42 421 aa25.3■■□□□ 1.64
STRN3-207ENST00000555358 NOCTQ9UK39 431 aaKnown RBP25.3■■□□□ 1.64
STRN3-207ENST00000555358 SMIM23A6NLE4 172 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 ANKRD63C9JTQ0 380 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 STRNO43815 780 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 SGPL1O95470 568 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 GCLMP48507 274 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 XRCC4Q13426 336 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 SIX1Q15475 284 aaPredicted RBP25.29■■□□□ 1.64
STRN3-207ENST00000555358 PIGWQ7Z7B1 504 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 NOP9Q86U38 636 aaKnown RBP25.29■■□□□ 1.64
STRN3-207ENST00000555358 TAX1BP1Q86VP1 789 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 CCDC197Q8NCU1 140 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 PLEKHO2Q8TD55 490 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 EPS8L1Q8TE68 723 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 SPIRE2Q8WWL2 714 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 WNT8AQ9H1J5 351 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 PCNTO95613 3336 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 LOC102724159A0A0B4J2E5 919 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 ASAP2O43150 1006 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 ATMINO43313 823 aaPredicted RBP25.29■■□□□ 1.64
STRN3-207ENST00000555358 RIPK2O43353 540 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 FGFR4P22455 802 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 CETN1Q12798 172 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 TTLL4Q14679 1199 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 PWP2Q15269 919 aaKnown RBP25.29■■□□□ 1.64
STRN3-207ENST00000555358 TAPT1Q6NXT6 567 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 CPNE8Q86YQ8 564 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 C12orf56Q8IXR9 622 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 ABRAQ8N0Z2 381 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 EPS8L3Q8TE67 593 aaKnown RBP25.29■■□□□ 1.64
STRN3-207ENST00000555358 ART4Q93070 314 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 SGSM3Q96HU1 749 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 CCDC134Q9H6E4 229 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 C17orf75Q9HAS0 396 aa25.29■■□□□ 1.64
STRN3-207ENST00000555358 DNAJC8O75937 253 aaPredicted RBP25.28■■□□□ 1.64
STRN3-207ENST00000555358 COILP38432 576 aaPredicted RBP25.28■■□□□ 1.64
STRN3-207ENST00000555358 TARBP2Q15633 366 aaKnown RBP25.28■■□□□ 1.64
STRN3-207ENST00000555358 SLC13A5Q86YT5 568 aaPredicted RBP25.28■■□□□ 1.64
STRN3-207ENST00000555358 CCT8L1PA6NM43 557 aa25.28■■□□□ 1.64
STRN3-207ENST00000555358 GZMAP12544 262 aa25.28■■□□□ 1.64
STRN3-207ENST00000555358 RARGP13631 454 aa25.28■■□□□ 1.64
STRN3-207ENST00000555358 CROCCP2Q86T23 111 aa25.28■■□□□ 1.64
STRN3-207ENST00000555358 SAPCD2Q86UD0 394 aa25.28■■□□□ 1.64
STRN3-207ENST00000555358 MAP4K3Q8IVH8 894 aa25.28■■□□□ 1.64
STRN3-207ENST00000555358 PARP9Q8IXQ6 854 aa25.28■■□□□ 1.64
STRN3-207ENST00000555358 SLC17A8Q8NDX2 589 aa25.28■■□□□ 1.64
STRN3-207ENST00000555358 NRBP2Q9NSY0 501 aa25.28■■□□□ 1.64
STRN3-207ENST00000555358 RTP1P59025 263 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 GRB14Q14449 540 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 SLMAPQ14BN4 828 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 DPP9Q86TI2 863 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 FAM71AQ8IYT1 594 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 LRRC34Q8IZ02 419 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 HSPBP1Q9NZL4 362 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 USP20Q9Y2K6 914 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 ATP2C2O75185 946 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 LGR5O75473 907 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 ADSSP30520 456 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 TAS1R3Q7RTX0 852 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 FAM228AQ86W67 206 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 UHMK1Q8TAS1 419 aaKnown RBP25.27■■□□□ 1.64
STRN3-207ENST00000555358 ASAP3Q8TDY4 903 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 IFT74Q96LB3 600 aa25.27■■□□□ 1.64
STRN3-207ENST00000555358 INTS9Q9NV88 658 aaKnown RBP25.27■■□□□ 1.64
STRN3-207ENST00000555358 SNAI1O95863 264 aaPredicted RBP25.26■■□□□ 1.63
STRN3-207ENST00000555358 RARAP10276 462 aa25.26■■□□□ 1.63
STRN3-207ENST00000555358 AUHQ13825 339 aaKnown RBP25.26■■□□□ 1.63
STRN3-207ENST00000555358 ITIH4Q14624 930 aa25.26■■□□□ 1.63
STRN3-207ENST00000555358 ZNF568Q3ZCX4 644 aa25.26■■□□□ 1.63
STRN3-207ENST00000555358 PLEKHH3Q7Z736 793 aa25.26■■□□□ 1.63
STRN3-207ENST00000555358 C12orf50Q8NA57 414 aaPredicted RBP25.26■■□□□ 1.63
STRN3-207ENST00000555358 SLC7A3Q8WY07 619 aa25.26■■□□□ 1.63
STRN3-207ENST00000555358 BTBD6Q96KE9 485 aa25.26■■□□□ 1.63
STRN3-207ENST00000555358 KREMEN1Q96MU8 473 aa25.26■■□□□ 1.63
STRN3-207ENST00000555358 MYCBPQ99417 103 aaPredicted RBP25.26■■□□□ 1.63
STRN3-207ENST00000555358 KATNBL1Q9H079 304 aa25.26■■□□□ 1.63
STRN3-207ENST00000555358 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.26■■□□□ 1.63
STRN3-207ENST00000555358 GLRA2P23416 452 aa25.25■■□□□ 1.63
STRN3-207ENST00000555358 SNCBQ16143 134 aa25.25■■□□□ 1.63
STRN3-207ENST00000555358 SLC39A4Q6P5W5 647 aa25.25■■□□□ 1.63
STRN3-207ENST00000555358 MAMDC4Q6UXC1 1216 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms