RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 ZC2HC1CQ53FD0 456 aaPredicted RBP12.87□□□□□ -0.35
VRK1-204ENST00000555351 SPATA1Q5VX52 437 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 CNNM4Q6P4Q7 775 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 DYMQ7RTS9 669 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 SFR1Q86XK3 245 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 NT5DC4Q86YG4 428 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 TCEAL8Q8IYN2 117 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 KCNG4Q8TDN1 519 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 KIF12Q96FN5 646 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 ACCSQ96QU6 501 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 MRPL44Q9H9J2 332 aaKnown RBP12.87□□□□□ -0.35
VRK1-204ENST00000555351 MAGEF1Q9HAY2 307 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 KCNK12Q9HB15 430 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 AVENQ9NQS1 362 aaPredicted RBP12.87□□□□□ -0.35
VRK1-204ENST00000555351 KBTBD4Q9NVX7 518 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 TUBGCP4Q9UGJ1 667 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 RAPGEFL1Q9UHV5 662 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 KCNH3Q9ULD8 1083 aa12.87□□□□□ -0.35
VRK1-204ENST00000555351 I3L4J1 428 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 OAZ2O95190 189 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 LAMP2P13473 410 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 GBP2P32456 591 aaPredicted RBP12.86□□□□□ -0.35
VRK1-204ENST00000555351 MCM4P33991 863 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 ROR1Q01973 937 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 L1TD1Q5T7N2 865 aaKnown RBP12.86□□□□□ -0.35
VRK1-204ENST00000555351 ADALQ6DHV7 355 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 ZNF280DQ6N043 979 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 RSPO2Q6UXX9 243 aaPredicted RBP12.86□□□□□ -0.35
VRK1-204ENST00000555351 CCDC65Q8IXS2 484 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 BEST2Q8NFU1 509 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 SLC7A14Q8TBB6 771 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 FEZF2Q8TBJ5 459 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 AGO2Q9UKV8 859 aaKnown RBP12.86□□□□□ -0.35
VRK1-204ENST00000555351 CFAP45Q9UL16 551 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 DUSP12Q9UNI6 340 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 TRIOO75962 3097 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 ZNF318Q5VUA4 2279 aa12.86□□□□□ -0.35
VRK1-204ENST00000555351 KMT2EQ8IZD2 1858 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 A0A087X0B3 334 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 ANKRD63C9JTQ0 380 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 ANHXE9PGG2 379 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 KIAA0391O15091 583 aaKnown RBP12.85□□□□□ -0.35
VRK1-204ENST00000555351 IL18RAPO95256 599 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 LDHAP00338 332 aaKnown RBP12.85□□□□□ -0.35
VRK1-204ENST00000555351 F13A1P00488 732 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 ASGR2P07307 311 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 TYMPP19971 482 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 GARTP22102 1010 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 FSHRP23945 695 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 ELF1P32519 619 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 TMEM132DQ14C87 1099 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 E2F4Q16254 413 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 CTXN3Q4LDR2 81 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 ZBTB41Q5SVQ8 909 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 STXBP4Q6ZWJ1 553 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 IQUBQ8NA54 791 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 MYADMQ96S97 322 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 PYM1Q9BRP8 204 aaKnown RBP12.85□□□□□ -0.35
VRK1-204ENST00000555351 TMEM206Q9H813 350 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 PANK4Q9NVE7 773 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 TFIP11Q9UBB9 837 aaKnown RBP12.85□□□□□ -0.35
VRK1-204ENST00000555351 AFF4Q9UHB7 1163 aaKnown RBP12.85□□□□□ -0.35
VRK1-204ENST00000555351 FBXL5Q9UKA1 691 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 CDH7Q9ULB5 785 aa12.85□□□□□ -0.35
VRK1-204ENST00000555351 ANO9A1A5B4 782 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 WDR27A2RRH5 827 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 OR6C75A6NL08 312 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 PIRO00625 290 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 MICAL2O94851 1124 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 IDEP14735 1019 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 ADSSP30520 456 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 CLCN5P51795 746 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 LILRA4P59901 499 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 YWHAHQ04917 246 aaPredicted RBP12.84□□□□□ -0.35
VRK1-204ENST00000555351 JADE1Q6IE81 842 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 MTSS1LQ765P7 747 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 GRASPQ7Z6J2 395 aaPredicted RBP12.84□□□□□ -0.35
VRK1-204ENST00000555351 POMGNT1Q8WZA1 660 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 IRF2BPLQ9H1B7 796 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 WNT16Q9UBV4 365 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 GTF3C3Q9Y5Q9 886 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 MYO10Q9HD67 2058 aa12.84□□□□□ -0.35
VRK1-204ENST00000555351 ANK1P16157 1881 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 EIF3DO15371 548 aaKnown RBP eCLIP12.83□□□□□ -0.36
VRK1-204ENST00000555351 GCNT3O95395 438 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 LRG1P02750 347 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 CYP11A1P05108 521 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 SRFP11831 508 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 ODC1P11926 461 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 PTPN2P17706 415 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 AVPR2P30518 371 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 ACOT2P49753 483 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 HTR4Q13639 388 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 MYBPC2Q14324 1141 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 PABPC1LQ4VXU2 614 aaKnown RBP12.83□□□□□ -0.36
VRK1-204ENST00000555351 C9orf57Q5W0N0 161 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 SHC4Q6S5L8 630 aa12.83□□□□□ -0.36
VRK1-204ENST00000555351 CRELD2Q6UXH1 353 aaPredicted RBP12.83□□□□□ -0.36
VRK1-204ENST00000555351 GET4Q7L5D6 327 aaPredicted RBP12.83□□□□□ -0.36
VRK1-204ENST00000555351 USP37Q86T82 979 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms